Protein–RNA interactions for Protein: Q925H1

Trps1, Zinc finger transcription factor Trps1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trps1Q925H1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trps1Q925H1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trps1Q925H1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trps1Q925H1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trps1Q925H1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trps1Q925H1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trps1Q925H1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Trps1Q925H1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trps1Q925H1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trps1Q925H1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trps1Q925H1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trps1Q925H1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trps1Q925H1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trps1Q925H1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Trps1Q925H1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trps1Q925H1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trps1Q925H1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trps1Q925H1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trps1Q925H1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trps1Q925H1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trps1Q925H1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trps1Q925H1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trps1Q925H1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.3■□□□□ 0.84
Trps1Q925H1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trps1Q925H1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trps1Q925H1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trps1Q925H1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trps1Q925H1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Trps1Q925H1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trps1Q925H1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Trps1Q925H1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.29■□□□□ 0.84
Trps1Q925H1 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.29■□□□□ 0.84
Trps1Q925H1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trps1Q925H1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Trps1Q925H1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trps1Q925H1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trps1Q925H1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trps1Q925H1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Trps1Q925H1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.28■□□□□ 0.84
Trps1Q925H1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trps1Q925H1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trps1Q925H1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Trps1Q925H1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trps1Q925H1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trps1Q925H1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trps1Q925H1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Trps1Q925H1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trps1Q925H1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trps1Q925H1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trps1Q925H1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.27■□□□□ 0.84
Trps1Q925H1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Trps1Q925H1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trps1Q925H1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trps1Q925H1 Gm43173-201ENSMUST00000202246 593 ntBASIC20.27■□□□□ 0.84
Trps1Q925H1 Gm45417-201ENSMUST00000209533 758 ntBASIC20.27■□□□□ 0.84
Trps1Q925H1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trps1Q925H1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trps1Q925H1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Trps1Q925H1 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.27■□□□□ 0.83
Trps1Q925H1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.27■□□□□ 0.83
Trps1Q925H1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Trps1Q925H1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trps1Q925H1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trps1Q925H1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trps1Q925H1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.26■□□□□ 0.83
Trps1Q925H1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Trps1Q925H1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trps1Q925H1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trps1Q925H1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trps1Q925H1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Trps1Q925H1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trps1Q925H1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trps1Q925H1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trps1Q925H1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Trps1Q925H1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trps1Q925H1 Gm8493-201ENSMUST00000196881 489 ntBASIC20.25■□□□□ 0.83
Trps1Q925H1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trps1Q925H1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.25■□□□□ 0.83
Trps1Q925H1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.25■□□□□ 0.83
Trps1Q925H1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.25■□□□□ 0.83
Trps1Q925H1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trps1Q925H1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trps1Q925H1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trps1Q925H1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.25■□□□□ 0.83
Trps1Q925H1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trps1Q925H1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Trps1Q925H1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trps1Q925H1 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.24■□□□□ 0.83
Trps1Q925H1 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.24■□□□□ 0.83
Trps1Q925H1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trps1Q925H1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trps1Q925H1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trps1Q925H1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trps1Q925H1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trps1Q925H1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trps1Q925H1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Trps1Q925H1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trps1Q925H1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Trps1Q925H1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trps1Q925H1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms