Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Chmp1aQ921W0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp1aQ921W0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp1aQ921W0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp1aQ921W0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp1aQ921W0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp1aQ921W0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp1aQ921W0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp1aQ921W0 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.2■□□□□ 0.34
Chmp1aQ921W0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp1aQ921W0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp1aQ921W0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp1aQ921W0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp1aQ921W0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp1aQ921W0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.19■□□□□ 0.34
Chmp1aQ921W0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Chmp1aQ921W0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp1aQ921W0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp1aQ921W0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp1aQ921W0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp1aQ921W0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp1aQ921W0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp1aQ921W0 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp1aQ921W0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp1aQ921W0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Chmp1aQ921W0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp1aQ921W0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp1aQ921W0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp1aQ921W0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp1aQ921W0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp1aQ921W0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp1aQ921W0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp1aQ921W0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Chmp1aQ921W0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp1aQ921W0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp1aQ921W0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Chmp1aQ921W0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.18■□□□□ 0.34
Chmp1aQ921W0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp1aQ921W0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Chmp1aQ921W0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp1aQ921W0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp1aQ921W0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Chmp1aQ921W0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp1aQ921W0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp1aQ921W0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp1aQ921W0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp1aQ921W0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Chmp1aQ921W0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp1aQ921W0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp1aQ921W0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp1aQ921W0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp1aQ921W0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp1aQ921W0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.17■□□□□ 0.34
Chmp1aQ921W0 Mir6538-201ENSMUST00000183713 110 ntBASIC17.17■□□□□ 0.34
Chmp1aQ921W0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp1aQ921W0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp1aQ921W0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Chmp1aQ921W0 Golph3-205ENSMUST00000228671 2842 ntBASIC17.16■□□□□ 0.34
Chmp1aQ921W0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Chmp1aQ921W0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp1aQ921W0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp1aQ921W0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Chmp1aQ921W0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp1aQ921W0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Chmp1aQ921W0 Gm45444-201ENSMUST00000211394 898 ntBASIC17.16■□□□□ 0.34
Chmp1aQ921W0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Chmp1aQ921W0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp1aQ921W0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp1aQ921W0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp1aQ921W0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp1aQ921W0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp1aQ921W0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp1aQ921W0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.16■□□□□ 0.34
Chmp1aQ921W0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp1aQ921W0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp1aQ921W0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.15■□□□□ 0.34
Chmp1aQ921W0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Chmp1aQ921W0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp1aQ921W0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.15■□□□□ 0.34
Chmp1aQ921W0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.15■□□□□ 0.34
Chmp1aQ921W0 Gm10399-202ENSMUST00000202768 748 ntBASIC17.15■□□□□ 0.34
Chmp1aQ921W0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.15■□□□□ 0.34
Chmp1aQ921W0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp1aQ921W0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp1aQ921W0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Chmp1aQ921W0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp1aQ921W0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp1aQ921W0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Chmp1aQ921W0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.15■□□□□ 0.34
Chmp1aQ921W0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp1aQ921W0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp1aQ921W0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp1aQ921W0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp1aQ921W0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp1aQ921W0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
Chmp1aQ921W0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Chmp1aQ921W0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp1aQ921W0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp1aQ921W0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp1aQ921W0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms