Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb5Q91XX5 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.42■□□□□ 0.7
Pcdhgb5Q91XX5 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb5Q91XX5 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.42■□□□□ 0.7
Pcdhgb5Q91XX5 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.42■□□□□ 0.7
Pcdhgb5Q91XX5 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb5Q91XX5 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb5Q91XX5 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Pcdhgb5Q91XX5 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.42■□□□□ 0.7
Pcdhgb5Q91XX5 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb5Q91XX5 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb5Q91XX5 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Pcdhgb5Q91XX5 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb5Q91XX5 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb5Q91XX5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Pcdhgb5Q91XX5 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Pcdhgb5Q91XX5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb5Q91XX5 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.41■□□□□ 0.7
Pcdhgb5Q91XX5 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.41■□□□□ 0.7
Pcdhgb5Q91XX5 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb5Q91XX5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Pcdhgb5Q91XX5 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.41■□□□□ 0.7
Pcdhgb5Q91XX5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.41■□□□□ 0.7
Pcdhgb5Q91XX5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Pcdhgb5Q91XX5 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb5Q91XX5 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Pcdhgb5Q91XX5 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb5Q91XX5 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb5Q91XX5 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb5Q91XX5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb5Q91XX5 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.4■□□□□ 0.7
Pcdhgb5Q91XX5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhgb5Q91XX5 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.39■□□□□ 0.69
Pcdhgb5Q91XX5 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb5Q91XX5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb5Q91XX5 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb5Q91XX5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb5Q91XX5 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb5Q91XX5 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb5Q91XX5 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb5Q91XX5 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb5Q91XX5 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Pcdhgb5Q91XX5 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb5Q91XX5 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb5Q91XX5 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.38■□□□□ 0.69
Pcdhgb5Q91XX5 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.38■□□□□ 0.69
Pcdhgb5Q91XX5 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb5Q91XX5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb5Q91XX5 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb5Q91XX5 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Pcdhgb5Q91XX5 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb5Q91XX5 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb5Q91XX5 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb5Q91XX5 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb5Q91XX5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb5Q91XX5 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.37■□□□□ 0.69
Pcdhgb5Q91XX5 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Pcdhgb5Q91XX5 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb5Q91XX5 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb5Q91XX5 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb5Q91XX5 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb5Q91XX5 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgb5Q91XX5 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgb5Q91XX5 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgb5Q91XX5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgb5Q91XX5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Pcdhgb5Q91XX5 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgb5Q91XX5 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgb5Q91XX5 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.36■□□□□ 0.69
Pcdhgb5Q91XX5 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.36■□□□□ 0.69
Pcdhgb5Q91XX5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Pcdhgb5Q91XX5 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgb5Q91XX5 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Pcdhgb5Q91XX5 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.35■□□□□ 0.69
Pcdhgb5Q91XX5 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.34■□□□□ 0.69
Pcdhgb5Q91XX5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgb5Q91XX5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.34■□□□□ 0.69
Pcdhgb5Q91XX5 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Pcdhgb5Q91XX5 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Pcdhgb5Q91XX5 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcdhgb5Q91XX5 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.34■□□□□ 0.69
Pcdhgb5Q91XX5 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgb5Q91XX5 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgb5Q91XX5 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
Pcdhgb5Q91XX5 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgb5Q91XX5 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhgb5Q91XX5 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhgb5Q91XX5 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Pcdhgb5Q91XX5 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhgb5Q91XX5 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhgb5Q91XX5 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.33■□□□□ 0.68
Pcdhgb5Q91XX5 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgb5Q91XX5 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pcdhgb5Q91XX5 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Pcdhgb5Q91XX5 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgb5Q91XX5 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgb5Q91XX5 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Pcdhgb5Q91XX5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgb5Q91XX5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.32■□□□□ 0.68
Pcdhgb5Q91XX5 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms