Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Pcdhgc5Q91XW9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhgc5Q91XW9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhgc5Q91XW9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhgc5Q91XW9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhgc5Q91XW9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhgc5Q91XW9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhgc5Q91XW9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Pcdhgc5Q91XW9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC22.25■■□□□ 1.15
Pcdhgc5Q91XW9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhgc5Q91XW9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhgc5Q91XW9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC22.25■■□□□ 1.15
Pcdhgc5Q91XW9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC22.25■■□□□ 1.15
Pcdhgc5Q91XW9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Pcdhgc5Q91XW9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhgc5Q91XW9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhgc5Q91XW9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhgc5Q91XW9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhgc5Q91XW9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhgc5Q91XW9 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhgc5Q91XW9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhgc5Q91XW9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhgc5Q91XW9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhgc5Q91XW9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Pcdhgc5Q91XW9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
Pcdhgc5Q91XW9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhgc5Q91XW9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhgc5Q91XW9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Pcdhgc5Q91XW9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhgc5Q91XW9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhgc5Q91XW9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhgc5Q91XW9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhgc5Q91XW9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhgc5Q91XW9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhgc5Q91XW9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhgc5Q91XW9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhgc5Q91XW9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhgc5Q91XW9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Pcdhgc5Q91XW9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhgc5Q91XW9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhgc5Q91XW9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhgc5Q91XW9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhgc5Q91XW9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhgc5Q91XW9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC22.22■■□□□ 1.15
Pcdhgc5Q91XW9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC22.22■■□□□ 1.15
Pcdhgc5Q91XW9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhgc5Q91XW9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhgc5Q91XW9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhgc5Q91XW9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhgc5Q91XW9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhgc5Q91XW9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhgc5Q91XW9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhgc5Q91XW9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhgc5Q91XW9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC22.21■■□□□ 1.15
Pcdhgc5Q91XW9 Gm9988-201ENSMUST00000069786 435 ntBASIC22.21■■□□□ 1.15
Pcdhgc5Q91XW9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhgc5Q91XW9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhgc5Q91XW9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
Pcdhgc5Q91XW9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhgc5Q91XW9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhgc5Q91XW9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC22.2■■□□□ 1.14
Pcdhgc5Q91XW9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhgc5Q91XW9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhgc5Q91XW9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhgc5Q91XW9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhgc5Q91XW9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhgc5Q91XW9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC22.2■■□□□ 1.14
Pcdhgc5Q91XW9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhgc5Q91XW9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhgc5Q91XW9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhgc5Q91XW9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC22.2■■□□□ 1.14
Pcdhgc5Q91XW9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Pcdhgc5Q91XW9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhgc5Q91XW9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhgc5Q91XW9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhgc5Q91XW9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC22.19■■□□□ 1.14
Pcdhgc5Q91XW9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhgc5Q91XW9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC22.19■■□□□ 1.14
Pcdhgc5Q91XW9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC22.19■■□□□ 1.14
Pcdhgc5Q91XW9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC22.19■■□□□ 1.14
Pcdhgc5Q91XW9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhgc5Q91XW9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhgc5Q91XW9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhgc5Q91XW9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhgc5Q91XW9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC22.18■■□□□ 1.14
Pcdhgc5Q91XW9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC22.18■■□□□ 1.14
Pcdhgc5Q91XW9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhgc5Q91XW9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhgc5Q91XW9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhgc5Q91XW9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhgc5Q91XW9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhgc5Q91XW9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhgc5Q91XW9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhgc5Q91XW9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhgc5Q91XW9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhgc5Q91XW9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Pcdhgc5Q91XW9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC22.17■■□□□ 1.14
Pcdhgc5Q91XW9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
Pcdhgc5Q91XW9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhgc5Q91XW9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms