Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
StrcQ8VIM6 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
StrcQ8VIM6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
StrcQ8VIM6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
StrcQ8VIM6 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
StrcQ8VIM6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
StrcQ8VIM6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
StrcQ8VIM6 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
StrcQ8VIM6 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
StrcQ8VIM6 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC23.88■■□□□ 1.41
StrcQ8VIM6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
StrcQ8VIM6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
StrcQ8VIM6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
StrcQ8VIM6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
StrcQ8VIM6 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC23.88■■□□□ 1.41
StrcQ8VIM6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
StrcQ8VIM6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
StrcQ8VIM6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
StrcQ8VIM6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
StrcQ8VIM6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
StrcQ8VIM6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC23.87■■□□□ 1.41
StrcQ8VIM6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
StrcQ8VIM6 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
StrcQ8VIM6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
StrcQ8VIM6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
StrcQ8VIM6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC23.86■■□□□ 1.41
StrcQ8VIM6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
StrcQ8VIM6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC23.85■■□□□ 1.41
StrcQ8VIM6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
StrcQ8VIM6 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
StrcQ8VIM6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC23.85■■□□□ 1.41
StrcQ8VIM6 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
StrcQ8VIM6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
StrcQ8VIM6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
StrcQ8VIM6 AC154266.1-201ENSMUST00000223190 503 ntBASIC23.84■■□□□ 1.41
StrcQ8VIM6 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
StrcQ8VIM6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
StrcQ8VIM6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
StrcQ8VIM6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
StrcQ8VIM6 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
StrcQ8VIM6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
StrcQ8VIM6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
StrcQ8VIM6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
StrcQ8VIM6 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC23.84■■□□□ 1.41
StrcQ8VIM6 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
StrcQ8VIM6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC23.84■■□□□ 1.41
StrcQ8VIM6 Gm715-201ENSMUST00000117865 831 ntBASIC23.83■■□□□ 1.41
StrcQ8VIM6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
StrcQ8VIM6 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
StrcQ8VIM6 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
StrcQ8VIM6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
StrcQ8VIM6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
StrcQ8VIM6 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
StrcQ8VIM6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
StrcQ8VIM6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
StrcQ8VIM6 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
StrcQ8VIM6 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
StrcQ8VIM6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
StrcQ8VIM6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
StrcQ8VIM6 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
StrcQ8VIM6 Gm5643-201ENSMUST00000117081 966 ntBASIC23.82■■□□□ 1.4
StrcQ8VIM6 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
StrcQ8VIM6 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
StrcQ8VIM6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
StrcQ8VIM6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
StrcQ8VIM6 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC23.81■■□□□ 1.4
StrcQ8VIM6 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
StrcQ8VIM6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
StrcQ8VIM6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
StrcQ8VIM6 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
StrcQ8VIM6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
StrcQ8VIM6 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
StrcQ8VIM6 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
StrcQ8VIM6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
StrcQ8VIM6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
StrcQ8VIM6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
StrcQ8VIM6 AC131586.2-201ENSMUST00000228370 1512 ntBASIC23.79■■□□□ 1.4
StrcQ8VIM6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
StrcQ8VIM6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
StrcQ8VIM6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC23.79■■□□□ 1.4
StrcQ8VIM6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC23.79■■□□□ 1.4
StrcQ8VIM6 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
StrcQ8VIM6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
StrcQ8VIM6 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
StrcQ8VIM6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
StrcQ8VIM6 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
StrcQ8VIM6 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC23.77■■□□□ 1.4
StrcQ8VIM6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
StrcQ8VIM6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
StrcQ8VIM6 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
StrcQ8VIM6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC23.76■■□□□ 1.39
StrcQ8VIM6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
StrcQ8VIM6 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
StrcQ8VIM6 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
StrcQ8VIM6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
StrcQ8VIM6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
StrcQ8VIM6 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
StrcQ8VIM6 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
StrcQ8VIM6 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC23.75■■□□□ 1.39
StrcQ8VIM6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms