Protein–RNA interactions for Protein: Q8VIG3

Rsph1, Radial spoke head 1 homolog, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph1Q8VIG3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rsph1Q8VIG3 Mir5133-201ENSMUST00000174955 77 ntBASIC20.47■□□□□ 0.87
Rsph1Q8VIG3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.47■□□□□ 0.87
Rsph1Q8VIG3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rsph1Q8VIG3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rsph1Q8VIG3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rsph1Q8VIG3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rsph1Q8VIG3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rsph1Q8VIG3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.46■□□□□ 0.87
Rsph1Q8VIG3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.46■□□□□ 0.87
Rsph1Q8VIG3 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.46■□□□□ 0.87
Rsph1Q8VIG3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rsph1Q8VIG3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Rsph1Q8VIG3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rsph1Q8VIG3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rsph1Q8VIG3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rsph1Q8VIG3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rsph1Q8VIG3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rsph1Q8VIG3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rsph1Q8VIG3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rsph1Q8VIG3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rsph1Q8VIG3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Rsph1Q8VIG3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rsph1Q8VIG3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Rsph1Q8VIG3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.45■□□□□ 0.86
Rsph1Q8VIG3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rsph1Q8VIG3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rsph1Q8VIG3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rsph1Q8VIG3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Rsph1Q8VIG3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rsph1Q8VIG3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Rsph1Q8VIG3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rsph1Q8VIG3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rsph1Q8VIG3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Rsph1Q8VIG3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.44■□□□□ 0.86
Rsph1Q8VIG3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rsph1Q8VIG3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rsph1Q8VIG3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rsph1Q8VIG3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rsph1Q8VIG3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.44■□□□□ 0.86
Rsph1Q8VIG3 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.44■□□□□ 0.86
Rsph1Q8VIG3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rsph1Q8VIG3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rsph1Q8VIG3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rsph1Q8VIG3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rsph1Q8VIG3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Rsph1Q8VIG3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rsph1Q8VIG3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rsph1Q8VIG3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rsph1Q8VIG3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rsph1Q8VIG3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rsph1Q8VIG3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Rsph1Q8VIG3 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.43■□□□□ 0.86
Rsph1Q8VIG3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Rsph1Q8VIG3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rsph1Q8VIG3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rsph1Q8VIG3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Rsph1Q8VIG3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Rsph1Q8VIG3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rsph1Q8VIG3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rsph1Q8VIG3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Rsph1Q8VIG3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rsph1Q8VIG3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rsph1Q8VIG3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.42■□□□□ 0.86
Rsph1Q8VIG3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rsph1Q8VIG3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rsph1Q8VIG3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Rsph1Q8VIG3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Rsph1Q8VIG3 Gm27011-201ENSMUST00000182352 972 ntBASIC20.41■□□□□ 0.86
Rsph1Q8VIG3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.41■□□□□ 0.86
Rsph1Q8VIG3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Rsph1Q8VIG3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.41■□□□□ 0.86
Rsph1Q8VIG3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rsph1Q8VIG3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rsph1Q8VIG3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rsph1Q8VIG3 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.41■□□□□ 0.86
Rsph1Q8VIG3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rsph1Q8VIG3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.4■□□□□ 0.86
Rsph1Q8VIG3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rsph1Q8VIG3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rsph1Q8VIG3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.4■□□□□ 0.86
Rsph1Q8VIG3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rsph1Q8VIG3 Gm13534-201ENSMUST00000121169 513 ntBASIC20.4■□□□□ 0.86
Rsph1Q8VIG3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rsph1Q8VIG3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Rsph1Q8VIG3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rsph1Q8VIG3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rsph1Q8VIG3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rsph1Q8VIG3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.4■□□□□ 0.86
Rsph1Q8VIG3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rsph1Q8VIG3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rsph1Q8VIG3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rsph1Q8VIG3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rsph1Q8VIG3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Rsph1Q8VIG3 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.39■□□□□ 0.85
Rsph1Q8VIG3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rsph1Q8VIG3 Gm12441-201ENSMUST00000121806 588 ntBASIC20.39■□□□□ 0.85
Rsph1Q8VIG3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.39■□□□□ 0.85
Rsph1Q8VIG3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rsph1Q8VIG3 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms