Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ndc1Q8VCB1 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.4■□□□□ 0.54
Ndc1Q8VCB1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ndc1Q8VCB1 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.4■□□□□ 0.54
Ndc1Q8VCB1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ndc1Q8VCB1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Ndc1Q8VCB1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ndc1Q8VCB1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ndc1Q8VCB1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ndc1Q8VCB1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ndc1Q8VCB1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ndc1Q8VCB1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ndc1Q8VCB1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.39■□□□□ 0.53
Ndc1Q8VCB1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Ndc1Q8VCB1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ndc1Q8VCB1 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.38■□□□□ 0.53
Ndc1Q8VCB1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ndc1Q8VCB1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ndc1Q8VCB1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ndc1Q8VCB1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ndc1Q8VCB1 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.38■□□□□ 0.53
Ndc1Q8VCB1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ndc1Q8VCB1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ndc1Q8VCB1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ndc1Q8VCB1 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.38■□□□□ 0.53
Ndc1Q8VCB1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ndc1Q8VCB1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ndc1Q8VCB1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ndc1Q8VCB1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ndc1Q8VCB1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ndc1Q8VCB1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ndc1Q8VCB1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Ndc1Q8VCB1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ndc1Q8VCB1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ndc1Q8VCB1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ndc1Q8VCB1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ndc1Q8VCB1 Gm42642-201ENSMUST00000200683 355 ntBASIC18.37■□□□□ 0.53
Ndc1Q8VCB1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.37■□□□□ 0.53
Ndc1Q8VCB1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ndc1Q8VCB1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Ndc1Q8VCB1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ndc1Q8VCB1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.36■□□□□ 0.53
Ndc1Q8VCB1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ndc1Q8VCB1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.36■□□□□ 0.53
Ndc1Q8VCB1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ndc1Q8VCB1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ndc1Q8VCB1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.36■□□□□ 0.53
Ndc1Q8VCB1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ndc1Q8VCB1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ndc1Q8VCB1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ndc1Q8VCB1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ndc1Q8VCB1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ndc1Q8VCB1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ndc1Q8VCB1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ndc1Q8VCB1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ndc1Q8VCB1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ndc1Q8VCB1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ndc1Q8VCB1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ndc1Q8VCB1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ndc1Q8VCB1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ndc1Q8VCB1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ndc1Q8VCB1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ndc1Q8VCB1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ndc1Q8VCB1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ndc1Q8VCB1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ndc1Q8VCB1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ndc1Q8VCB1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ndc1Q8VCB1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ndc1Q8VCB1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ndc1Q8VCB1 Gm26571-201ENSMUST00000181399 666 ntBASIC18.35■□□□□ 0.53
Ndc1Q8VCB1 Gm42569-201ENSMUST00000200539 472 ntBASIC18.35■□□□□ 0.53
Ndc1Q8VCB1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ndc1Q8VCB1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ndc1Q8VCB1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ndc1Q8VCB1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ndc1Q8VCB1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ndc1Q8VCB1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ndc1Q8VCB1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ndc1Q8VCB1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ndc1Q8VCB1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ndc1Q8VCB1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Ndc1Q8VCB1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ndc1Q8VCB1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.34■□□□□ 0.53
Ndc1Q8VCB1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ndc1Q8VCB1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ndc1Q8VCB1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ndc1Q8VCB1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Ndc1Q8VCB1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.34■□□□□ 0.53
Ndc1Q8VCB1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ndc1Q8VCB1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ndc1Q8VCB1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ndc1Q8VCB1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Ndc1Q8VCB1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ndc1Q8VCB1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.33■□□□□ 0.52
Ndc1Q8VCB1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ndc1Q8VCB1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ndc1Q8VCB1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ndc1Q8VCB1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ndc1Q8VCB1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ndc1Q8VCB1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms