Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Gm5408-201ENSMUST00000197998 747 ntBASIC22.5■■□□□ 1.19
Usp33Q8R5K2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Usp33Q8R5K2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Usp33Q8R5K2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Usp33Q8R5K2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Usp33Q8R5K2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Usp33Q8R5K2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Usp33Q8R5K2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC22.49■■□□□ 1.19
Usp33Q8R5K2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Usp33Q8R5K2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Usp33Q8R5K2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Usp33Q8R5K2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Usp33Q8R5K2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Usp33Q8R5K2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Usp33Q8R5K2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Usp33Q8R5K2 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Usp33Q8R5K2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Usp33Q8R5K2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Usp33Q8R5K2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Usp33Q8R5K2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC22.48■■□□□ 1.19
Usp33Q8R5K2 Gm20760-201ENSMUST00000179197 648 ntBASIC22.48■■□□□ 1.19
Usp33Q8R5K2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC22.48■■□□□ 1.19
Usp33Q8R5K2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Usp33Q8R5K2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Usp33Q8R5K2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Usp33Q8R5K2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Usp33Q8R5K2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp33Q8R5K2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Usp33Q8R5K2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp33Q8R5K2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Usp33Q8R5K2 Gm6365-201ENSMUST00000054711 744 ntBASIC22.47■■□□□ 1.19
Usp33Q8R5K2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Usp33Q8R5K2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC22.46■■□□□ 1.19
Usp33Q8R5K2 Gm12527-201ENSMUST00000117967 564 ntBASIC22.46■■□□□ 1.19
Usp33Q8R5K2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Usp33Q8R5K2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Usp33Q8R5K2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Usp33Q8R5K2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Usp33Q8R5K2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Usp33Q8R5K2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Usp33Q8R5K2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Usp33Q8R5K2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Usp33Q8R5K2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.18
Usp33Q8R5K2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Usp33Q8R5K2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Usp33Q8R5K2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Usp33Q8R5K2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC22.45■■□□□ 1.18
Usp33Q8R5K2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Usp33Q8R5K2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Usp33Q8R5K2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Usp33Q8R5K2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC22.45■■□□□ 1.18
Usp33Q8R5K2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Usp33Q8R5K2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Usp33Q8R5K2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC22.44■■□□□ 1.18
Usp33Q8R5K2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp33Q8R5K2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
Usp33Q8R5K2 Gm13148-201ENSMUST00000118892 745 ntBASIC22.44■■□□□ 1.18
Usp33Q8R5K2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Usp33Q8R5K2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
Usp33Q8R5K2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC22.44■■□□□ 1.18
Usp33Q8R5K2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC22.44■■□□□ 1.18
Usp33Q8R5K2 Gm38205-201ENSMUST00000192243 258 ntBASIC22.44■■□□□ 1.18
Usp33Q8R5K2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp33Q8R5K2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC22.44■■□□□ 1.18
Usp33Q8R5K2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp33Q8R5K2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp33Q8R5K2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Usp33Q8R5K2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Usp33Q8R5K2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Usp33Q8R5K2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Usp33Q8R5K2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Usp33Q8R5K2 Gm43859-201ENSMUST00000200075 1412 ntBASIC22.43■■□□□ 1.18
Usp33Q8R5K2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Usp33Q8R5K2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Usp33Q8R5K2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
Usp33Q8R5K2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Usp33Q8R5K2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Usp33Q8R5K2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Usp33Q8R5K2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC22.43■■□□□ 1.18
Usp33Q8R5K2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Usp33Q8R5K2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Usp33Q8R5K2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Usp33Q8R5K2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Usp33Q8R5K2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Usp33Q8R5K2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC22.42■■□□□ 1.18
Usp33Q8R5K2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Usp33Q8R5K2 Gm6420-201ENSMUST00000193885 723 ntBASIC22.42■■□□□ 1.18
Usp33Q8R5K2 CT030146.1-201ENSMUST00000220919 217 ntBASIC22.42■■□□□ 1.18
Usp33Q8R5K2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Usp33Q8R5K2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Usp33Q8R5K2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
Usp33Q8R5K2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Usp33Q8R5K2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC22.41■■□□□ 1.18
Usp33Q8R5K2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Usp33Q8R5K2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Usp33Q8R5K2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Usp33Q8R5K2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC22.41■■□□□ 1.18
Usp33Q8R5K2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Usp33Q8R5K2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Usp33Q8R5K2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 272.4 ms