Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Gm29257-201ENSMUST00000186115 639 ntBASIC20.13■□□□□ 0.81
Sh3kbp1Q8R550 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3kbp1Q8R550 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3kbp1Q8R550 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3kbp1Q8R550 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3kbp1Q8R550 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3kbp1Q8R550 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3kbp1Q8R550 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3kbp1Q8R550 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3kbp1Q8R550 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3kbp1Q8R550 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3kbp1Q8R550 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Sh3kbp1Q8R550 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Sh3kbp1Q8R550 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3kbp1Q8R550 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Sh3kbp1Q8R550 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3kbp1Q8R550 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3kbp1Q8R550 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3kbp1Q8R550 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3kbp1Q8R550 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3kbp1Q8R550 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3kbp1Q8R550 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3kbp1Q8R550 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
Sh3kbp1Q8R550 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Sh3kbp1Q8R550 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3kbp1Q8R550 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3kbp1Q8R550 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.11■□□□□ 0.81
Sh3kbp1Q8R550 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3kbp1Q8R550 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3kbp1Q8R550 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Sh3kbp1Q8R550 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3kbp1Q8R550 Smad6-203ENSMUST00000179458 273 ntBASIC20.1■□□□□ 0.81
Sh3kbp1Q8R550 Gm26571-201ENSMUST00000181399 666 ntBASIC20.1■□□□□ 0.81
Sh3kbp1Q8R550 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3kbp1Q8R550 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3kbp1Q8R550 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3kbp1Q8R550 Gm10493-201ENSMUST00000097270 612 ntBASIC20.1■□□□□ 0.81
Sh3kbp1Q8R550 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3kbp1Q8R550 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.1■□□□□ 0.81
Sh3kbp1Q8R550 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Sh3kbp1Q8R550 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3kbp1Q8R550 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3kbp1Q8R550 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3kbp1Q8R550 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3kbp1Q8R550 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.09■□□□□ 0.81
Sh3kbp1Q8R550 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.09■□□□□ 0.81
Sh3kbp1Q8R550 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3kbp1Q8R550 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
Sh3kbp1Q8R550 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3kbp1Q8R550 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3kbp1Q8R550 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.09■□□□□ 0.81
Sh3kbp1Q8R550 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3kbp1Q8R550 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Sh3kbp1Q8R550 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Sh3kbp1Q8R550 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
Sh3kbp1Q8R550 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.08■□□□□ 0.81
Sh3kbp1Q8R550 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sh3kbp1Q8R550 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.08■□□□□ 0.81
Sh3kbp1Q8R550 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sh3kbp1Q8R550 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.08■□□□□ 0.81
Sh3kbp1Q8R550 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.08■□□□□ 0.81
Sh3kbp1Q8R550 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Sh3kbp1Q8R550 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sh3kbp1Q8R550 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Sh3kbp1Q8R550 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.08■□□□□ 0.8
Sh3kbp1Q8R550 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Sh3kbp1Q8R550 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sh3kbp1Q8R550 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sh3kbp1Q8R550 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sh3kbp1Q8R550 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sh3kbp1Q8R550 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Sh3kbp1Q8R550 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sh3kbp1Q8R550 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.07■□□□□ 0.8
Sh3kbp1Q8R550 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Sh3kbp1Q8R550 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Sh3kbp1Q8R550 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sh3kbp1Q8R550 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sh3kbp1Q8R550 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Sh3kbp1Q8R550 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.07■□□□□ 0.8
Sh3kbp1Q8R550 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sh3kbp1Q8R550 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sh3kbp1Q8R550 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sh3kbp1Q8R550 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Sh3kbp1Q8R550 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sh3kbp1Q8R550 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.06■□□□□ 0.8
Sh3kbp1Q8R550 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Sh3kbp1Q8R550 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.06■□□□□ 0.8
Sh3kbp1Q8R550 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Sh3kbp1Q8R550 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sh3kbp1Q8R550 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sh3kbp1Q8R550 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Sh3kbp1Q8R550 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.06■□□□□ 0.8
Sh3kbp1Q8R550 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Sh3kbp1Q8R550 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sh3kbp1Q8R550 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sh3kbp1Q8R550 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Sh3kbp1Q8R550 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
Sh3kbp1Q8R550 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sh3kbp1Q8R550 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sh3kbp1Q8R550 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms