Protein–RNA interactions for Protein: Q8R4I1

Atxn7, Ataxin-7, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn7Q8R4I1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Atxn7Q8R4I1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Atxn7Q8R4I1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Atxn7Q8R4I1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Atxn7Q8R4I1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Atxn7Q8R4I1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Atxn7Q8R4I1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC22.78■■□□□ 1.24
Atxn7Q8R4I1 Gm13146-201ENSMUST00000118508 780 ntBASIC22.78■■□□□ 1.24
Atxn7Q8R4I1 CT010467.1-202ENSMUST00000205406 714 ntBASIC22.78■■□□□ 1.24
Atxn7Q8R4I1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Atxn7Q8R4I1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Atxn7Q8R4I1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC22.78■■□□□ 1.24
Atxn7Q8R4I1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Atxn7Q8R4I1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.77■■□□□ 1.24
Atxn7Q8R4I1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Atxn7Q8R4I1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Atxn7Q8R4I1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Atxn7Q8R4I1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Atxn7Q8R4I1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC22.77■■□□□ 1.24
Atxn7Q8R4I1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC22.77■■□□□ 1.24
Atxn7Q8R4I1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Atxn7Q8R4I1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Atxn7Q8R4I1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Atxn7Q8R4I1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Atxn7Q8R4I1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Atxn7Q8R4I1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Atxn7Q8R4I1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC22.76■■□□□ 1.23
Atxn7Q8R4I1 AA386476-201ENSMUST00000098781 1665 ntBASIC22.76■■□□□ 1.23
Atxn7Q8R4I1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Atxn7Q8R4I1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Atxn7Q8R4I1 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
Atxn7Q8R4I1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.75■■□□□ 1.23
Atxn7Q8R4I1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC22.75■■□□□ 1.23
Atxn7Q8R4I1 Mir5133-201ENSMUST00000174955 77 ntBASIC22.75■■□□□ 1.23
Atxn7Q8R4I1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Atxn7Q8R4I1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Atxn7Q8R4I1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Atxn7Q8R4I1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Atxn7Q8R4I1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Atxn7Q8R4I1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Atxn7Q8R4I1 AC154266.1-201ENSMUST00000223190 503 ntBASIC22.74■■□□□ 1.23
Atxn7Q8R4I1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.73■■□□□ 1.23
Atxn7Q8R4I1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Atxn7Q8R4I1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Atxn7Q8R4I1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC22.73■■□□□ 1.23
Atxn7Q8R4I1 Gm15043-201ENSMUST00000118843 1543 ntBASIC22.73■■□□□ 1.23
Atxn7Q8R4I1 Gm43909-201ENSMUST00000203443 1876 ntBASIC22.73■■□□□ 1.23
Atxn7Q8R4I1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Atxn7Q8R4I1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Atxn7Q8R4I1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Atxn7Q8R4I1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC22.73■■□□□ 1.23
Atxn7Q8R4I1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC22.73■■□□□ 1.23
Atxn7Q8R4I1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Atxn7Q8R4I1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Atxn7Q8R4I1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.72■■□□□ 1.23
Atxn7Q8R4I1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Atxn7Q8R4I1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Atxn7Q8R4I1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Atxn7Q8R4I1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Atxn7Q8R4I1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Atxn7Q8R4I1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Atxn7Q8R4I1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Atxn7Q8R4I1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Atxn7Q8R4I1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Atxn7Q8R4I1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.23
Atxn7Q8R4I1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Atxn7Q8R4I1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Atxn7Q8R4I1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Atxn7Q8R4I1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Atxn7Q8R4I1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Atxn7Q8R4I1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Atxn7Q8R4I1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Atxn7Q8R4I1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Atxn7Q8R4I1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Atxn7Q8R4I1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC22.7■■□□□ 1.22
Atxn7Q8R4I1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Atxn7Q8R4I1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC22.69■■□□□ 1.22
Atxn7Q8R4I1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Atxn7Q8R4I1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Atxn7Q8R4I1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Atxn7Q8R4I1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC22.69■■□□□ 1.22
Atxn7Q8R4I1 Gm6420-201ENSMUST00000193885 723 ntBASIC22.69■■□□□ 1.22
Atxn7Q8R4I1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC22.69■■□□□ 1.22
Atxn7Q8R4I1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Atxn7Q8R4I1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Atxn7Q8R4I1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Atxn7Q8R4I1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Atxn7Q8R4I1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Atxn7Q8R4I1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Atxn7Q8R4I1 Gm12441-201ENSMUST00000121806 588 ntBASIC22.68■■□□□ 1.22
Atxn7Q8R4I1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC22.68■■□□□ 1.22
Atxn7Q8R4I1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Atxn7Q8R4I1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Atxn7Q8R4I1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Atxn7Q8R4I1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Atxn7Q8R4I1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.67■■□□□ 1.22
Atxn7Q8R4I1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Atxn7Q8R4I1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC22.67■■□□□ 1.22
Atxn7Q8R4I1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Atxn7Q8R4I1 Gm13148-201ENSMUST00000118892 745 ntBASIC22.67■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms