Protein–RNA interactions for Protein: Q8R2U7

Lrrc42, Leucine-rich repeat-containing protein 42, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc42Q8R2U7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrrc42Q8R2U7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrrc42Q8R2U7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lrrc42Q8R2U7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrrc42Q8R2U7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lrrc42Q8R2U7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lrrc42Q8R2U7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lrrc42Q8R2U7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrrc42Q8R2U7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrrc42Q8R2U7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrrc42Q8R2U7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrrc42Q8R2U7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrrc42Q8R2U7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrrc42Q8R2U7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrrc42Q8R2U7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Lrrc42Q8R2U7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrrc42Q8R2U7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lrrc42Q8R2U7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrrc42Q8R2U7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.29■□□□□ 0.84
Lrrc42Q8R2U7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrrc42Q8R2U7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrrc42Q8R2U7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrrc42Q8R2U7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrrc42Q8R2U7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lrrc42Q8R2U7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lrrc42Q8R2U7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.28■□□□□ 0.84
Lrrc42Q8R2U7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrrc42Q8R2U7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrrc42Q8R2U7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrrc42Q8R2U7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrrc42Q8R2U7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrrc42Q8R2U7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrrc42Q8R2U7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Lrrc42Q8R2U7 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrrc42Q8R2U7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Lrrc42Q8R2U7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lrrc42Q8R2U7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lrrc42Q8R2U7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Lrrc42Q8R2U7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lrrc42Q8R2U7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
Lrrc42Q8R2U7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.27■□□□□ 0.84
Lrrc42Q8R2U7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.27■□□□□ 0.84
Lrrc42Q8R2U7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lrrc42Q8R2U7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lrrc42Q8R2U7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lrrc42Q8R2U7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lrrc42Q8R2U7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lrrc42Q8R2U7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
Lrrc42Q8R2U7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.27■□□□□ 0.83
Lrrc42Q8R2U7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Lrrc42Q8R2U7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrrc42Q8R2U7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrrc42Q8R2U7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Lrrc42Q8R2U7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrrc42Q8R2U7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lrrc42Q8R2U7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Lrrc42Q8R2U7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrrc42Q8R2U7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Lrrc42Q8R2U7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lrrc42Q8R2U7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lrrc42Q8R2U7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.25■□□□□ 0.83
Lrrc42Q8R2U7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lrrc42Q8R2U7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lrrc42Q8R2U7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Lrrc42Q8R2U7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lrrc42Q8R2U7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lrrc42Q8R2U7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lrrc42Q8R2U7 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lrrc42Q8R2U7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lrrc42Q8R2U7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrrc42Q8R2U7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrrc42Q8R2U7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Lrrc42Q8R2U7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrrc42Q8R2U7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrrc42Q8R2U7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrrc42Q8R2U7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.24■□□□□ 0.83
Lrrc42Q8R2U7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.24■□□□□ 0.83
Lrrc42Q8R2U7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrrc42Q8R2U7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrrc42Q8R2U7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrrc42Q8R2U7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrrc42Q8R2U7 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.24■□□□□ 0.83
Lrrc42Q8R2U7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.23■□□□□ 0.83
Lrrc42Q8R2U7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Lrrc42Q8R2U7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.23■□□□□ 0.83
Lrrc42Q8R2U7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrrc42Q8R2U7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrrc42Q8R2U7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrrc42Q8R2U7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Lrrc42Q8R2U7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.23■□□□□ 0.83
Lrrc42Q8R2U7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lrrc42Q8R2U7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrrc42Q8R2U7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Lrrc42Q8R2U7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrrc42Q8R2U7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrrc42Q8R2U7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrrc42Q8R2U7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrrc42Q8R2U7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrrc42Q8R2U7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Lrrc42Q8R2U7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms