Protein–RNA interactions for Protein: Q8R2E1

Vmn1r38, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r38Q8R2E1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vmn1r38Q8R2E1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vmn1r38Q8R2E1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vmn1r38Q8R2E1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Vmn1r38Q8R2E1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vmn1r38Q8R2E1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vmn1r38Q8R2E1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vmn1r38Q8R2E1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vmn1r38Q8R2E1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.31■□□□□ 0.52
Vmn1r38Q8R2E1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vmn1r38Q8R2E1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vmn1r38Q8R2E1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vmn1r38Q8R2E1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vmn1r38Q8R2E1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vmn1r38Q8R2E1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vmn1r38Q8R2E1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.3■□□□□ 0.52
Vmn1r38Q8R2E1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vmn1r38Q8R2E1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vmn1r38Q8R2E1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vmn1r38Q8R2E1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vmn1r38Q8R2E1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Vmn1r38Q8R2E1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Vmn1r38Q8R2E1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vmn1r38Q8R2E1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
Vmn1r38Q8R2E1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.3■□□□□ 0.52
Vmn1r38Q8R2E1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vmn1r38Q8R2E1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vmn1r38Q8R2E1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vmn1r38Q8R2E1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
Vmn1r38Q8R2E1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Vmn1r38Q8R2E1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vmn1r38Q8R2E1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vmn1r38Q8R2E1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Vmn1r38Q8R2E1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vmn1r38Q8R2E1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vmn1r38Q8R2E1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vmn1r38Q8R2E1 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.29■□□□□ 0.52
Vmn1r38Q8R2E1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Vmn1r38Q8R2E1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vmn1r38Q8R2E1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Vmn1r38Q8R2E1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Vmn1r38Q8R2E1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vmn1r38Q8R2E1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vmn1r38Q8R2E1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Vmn1r38Q8R2E1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.28■□□□□ 0.52
Vmn1r38Q8R2E1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.28■□□□□ 0.52
Vmn1r38Q8R2E1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.28■□□□□ 0.52
Vmn1r38Q8R2E1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vmn1r38Q8R2E1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Vmn1r38Q8R2E1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Vmn1r38Q8R2E1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vmn1r38Q8R2E1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vmn1r38Q8R2E1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vmn1r38Q8R2E1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vmn1r38Q8R2E1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Vmn1r38Q8R2E1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vmn1r38Q8R2E1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.27■□□□□ 0.52
Vmn1r38Q8R2E1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.27■□□□□ 0.52
Vmn1r38Q8R2E1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vmn1r38Q8R2E1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vmn1r38Q8R2E1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vmn1r38Q8R2E1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vmn1r38Q8R2E1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vmn1r38Q8R2E1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vmn1r38Q8R2E1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vmn1r38Q8R2E1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vmn1r38Q8R2E1 Etf1-202ENSMUST00000180351 108 ntBASIC18.26■□□□□ 0.51
Vmn1r38Q8R2E1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.26■□□□□ 0.51
Vmn1r38Q8R2E1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vmn1r38Q8R2E1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Vmn1r38Q8R2E1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Vmn1r38Q8R2E1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Vmn1r38Q8R2E1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vmn1r38Q8R2E1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Vmn1r38Q8R2E1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vmn1r38Q8R2E1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vmn1r38Q8R2E1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.26■□□□□ 0.51
Vmn1r38Q8R2E1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vmn1r38Q8R2E1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vmn1r38Q8R2E1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vmn1r38Q8R2E1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.25■□□□□ 0.51
Vmn1r38Q8R2E1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vmn1r38Q8R2E1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vmn1r38Q8R2E1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vmn1r38Q8R2E1 Gm15820-201ENSMUST00000201566 728 ntBASIC18.25■□□□□ 0.51
Vmn1r38Q8R2E1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vmn1r38Q8R2E1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Vmn1r38Q8R2E1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vmn1r38Q8R2E1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vmn1r38Q8R2E1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vmn1r38Q8R2E1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Vmn1r38Q8R2E1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vmn1r38Q8R2E1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vmn1r38Q8R2E1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Vmn1r38Q8R2E1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.24■□□□□ 0.51
Vmn1r38Q8R2E1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vmn1r38Q8R2E1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vmn1r38Q8R2E1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vmn1r38Q8R2E1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vmn1r38Q8R2E1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms