Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nudcd3Q8R1N4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nudcd3Q8R1N4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Nudcd3Q8R1N4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nudcd3Q8R1N4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nudcd3Q8R1N4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nudcd3Q8R1N4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nudcd3Q8R1N4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nudcd3Q8R1N4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nudcd3Q8R1N4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.49■□□□□ 0.71
Nudcd3Q8R1N4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Nudcd3Q8R1N4 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nudcd3Q8R1N4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nudcd3Q8R1N4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nudcd3Q8R1N4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Nudcd3Q8R1N4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.48■□□□□ 0.71
Nudcd3Q8R1N4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nudcd3Q8R1N4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nudcd3Q8R1N4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Nudcd3Q8R1N4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nudcd3Q8R1N4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.48■□□□□ 0.71
Nudcd3Q8R1N4 Gm10232-201ENSMUST00000089221 720 ntBASIC19.48■□□□□ 0.71
Nudcd3Q8R1N4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nudcd3Q8R1N4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nudcd3Q8R1N4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nudcd3Q8R1N4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.47■□□□□ 0.71
Nudcd3Q8R1N4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.47■□□□□ 0.71
Nudcd3Q8R1N4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Nudcd3Q8R1N4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nudcd3Q8R1N4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nudcd3Q8R1N4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nudcd3Q8R1N4 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nudcd3Q8R1N4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nudcd3Q8R1N4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Nudcd3Q8R1N4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Nudcd3Q8R1N4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nudcd3Q8R1N4 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.47■□□□□ 0.71
Nudcd3Q8R1N4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nudcd3Q8R1N4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nudcd3Q8R1N4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nudcd3Q8R1N4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nudcd3Q8R1N4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nudcd3Q8R1N4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nudcd3Q8R1N4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nudcd3Q8R1N4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.46■□□□□ 0.71
Nudcd3Q8R1N4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nudcd3Q8R1N4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nudcd3Q8R1N4 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nudcd3Q8R1N4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Nudcd3Q8R1N4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nudcd3Q8R1N4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Nudcd3Q8R1N4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nudcd3Q8R1N4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nudcd3Q8R1N4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Nudcd3Q8R1N4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nudcd3Q8R1N4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Nudcd3Q8R1N4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nudcd3Q8R1N4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nudcd3Q8R1N4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nudcd3Q8R1N4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nudcd3Q8R1N4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nudcd3Q8R1N4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nudcd3Q8R1N4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nudcd3Q8R1N4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nudcd3Q8R1N4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.44■□□□□ 0.7
Nudcd3Q8R1N4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.44■□□□□ 0.7
Nudcd3Q8R1N4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Nudcd3Q8R1N4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nudcd3Q8R1N4 Gm5921-201ENSMUST00000075898 882 ntBASIC19.44■□□□□ 0.7
Nudcd3Q8R1N4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nudcd3Q8R1N4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.44■□□□□ 0.7
Nudcd3Q8R1N4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Nudcd3Q8R1N4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nudcd3Q8R1N4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nudcd3Q8R1N4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nudcd3Q8R1N4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nudcd3Q8R1N4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nudcd3Q8R1N4 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Nudcd3Q8R1N4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nudcd3Q8R1N4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Nudcd3Q8R1N4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nudcd3Q8R1N4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Nudcd3Q8R1N4 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.43■□□□□ 0.7
Nudcd3Q8R1N4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nudcd3Q8R1N4 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nudcd3Q8R1N4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nudcd3Q8R1N4 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nudcd3Q8R1N4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nudcd3Q8R1N4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nudcd3Q8R1N4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nudcd3Q8R1N4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nudcd3Q8R1N4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nudcd3Q8R1N4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Nudcd3Q8R1N4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nudcd3Q8R1N4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nudcd3Q8R1N4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nudcd3Q8R1N4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nudcd3Q8R1N4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nudcd3Q8R1N4 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nudcd3Q8R1N4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms