Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pdlim2Q8R1G6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pdlim2Q8R1G6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pdlim2Q8R1G6 Gm15853-202ENSMUST00000195518 2041 ntBASIC22.63■■□□□ 1.21
Pdlim2Q8R1G6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.63■■□□□ 1.21
Pdlim2Q8R1G6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pdlim2Q8R1G6 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pdlim2Q8R1G6 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pdlim2Q8R1G6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pdlim2Q8R1G6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pdlim2Q8R1G6 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pdlim2Q8R1G6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC22.62■■□□□ 1.21
Pdlim2Q8R1G6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC22.62■■□□□ 1.21
Pdlim2Q8R1G6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pdlim2Q8R1G6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Pdlim2Q8R1G6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.62■■□□□ 1.21
Pdlim2Q8R1G6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC22.62■■□□□ 1.21
Pdlim2Q8R1G6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pdlim2Q8R1G6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
Pdlim2Q8R1G6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pdlim2Q8R1G6 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pdlim2Q8R1G6 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Pdlim2Q8R1G6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pdlim2Q8R1G6 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Pdlim2Q8R1G6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pdlim2Q8R1G6 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pdlim2Q8R1G6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pdlim2Q8R1G6 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Pdlim2Q8R1G6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
Pdlim2Q8R1G6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Pdlim2Q8R1G6 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Pdlim2Q8R1G6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Pdlim2Q8R1G6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pdlim2Q8R1G6 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pdlim2Q8R1G6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pdlim2Q8R1G6 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pdlim2Q8R1G6 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Pdlim2Q8R1G6 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Pdlim2Q8R1G6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pdlim2Q8R1G6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Pdlim2Q8R1G6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Pdlim2Q8R1G6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pdlim2Q8R1G6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Pdlim2Q8R1G6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Pdlim2Q8R1G6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Pdlim2Q8R1G6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Pdlim2Q8R1G6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pdlim2Q8R1G6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pdlim2Q8R1G6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pdlim2Q8R1G6 Gm37352-201ENSMUST00000193908 2181 ntBASIC22.58■■□□□ 1.21
Pdlim2Q8R1G6 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Pdlim2Q8R1G6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Pdlim2Q8R1G6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Pdlim2Q8R1G6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pdlim2Q8R1G6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC22.57■■□□□ 1.2
Pdlim2Q8R1G6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pdlim2Q8R1G6 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pdlim2Q8R1G6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.57■■□□□ 1.2
Pdlim2Q8R1G6 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Pdlim2Q8R1G6 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pdlim2Q8R1G6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pdlim2Q8R1G6 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pdlim2Q8R1G6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pdlim2Q8R1G6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pdlim2Q8R1G6 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Pdlim2Q8R1G6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.56■■□□□ 1.2
Pdlim2Q8R1G6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pdlim2Q8R1G6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pdlim2Q8R1G6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pdlim2Q8R1G6 Gm5898-201ENSMUST00000121016 2071 ntBASIC22.56■■□□□ 1.2
Pdlim2Q8R1G6 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pdlim2Q8R1G6 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pdlim2Q8R1G6 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pdlim2Q8R1G6 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pdlim2Q8R1G6 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pdlim2Q8R1G6 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pdlim2Q8R1G6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
Pdlim2Q8R1G6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pdlim2Q8R1G6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pdlim2Q8R1G6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pdlim2Q8R1G6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pdlim2Q8R1G6 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pdlim2Q8R1G6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pdlim2Q8R1G6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC22.54■■□□□ 1.2
Pdlim2Q8R1G6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pdlim2Q8R1G6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pdlim2Q8R1G6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pdlim2Q8R1G6 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pdlim2Q8R1G6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Pdlim2Q8R1G6 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pdlim2Q8R1G6 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pdlim2Q8R1G6 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pdlim2Q8R1G6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pdlim2Q8R1G6 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pdlim2Q8R1G6 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pdlim2Q8R1G6 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Pdlim2Q8R1G6 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pdlim2Q8R1G6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pdlim2Q8R1G6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pdlim2Q8R1G6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms