Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Zc3h3Q8CHP0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Zc3h3Q8CHP0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Zc3h3Q8CHP0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Zc3h3Q8CHP0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Zc3h3Q8CHP0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Zc3h3Q8CHP0 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.31■□□□□ 0.68
Zc3h3Q8CHP0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Zc3h3Q8CHP0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Zc3h3Q8CHP0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Zc3h3Q8CHP0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Zc3h3Q8CHP0 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Zc3h3Q8CHP0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Zc3h3Q8CHP0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Zc3h3Q8CHP0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Zc3h3Q8CHP0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Zc3h3Q8CHP0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Zc3h3Q8CHP0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Zc3h3Q8CHP0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Zc3h3Q8CHP0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Zc3h3Q8CHP0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Zc3h3Q8CHP0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Zc3h3Q8CHP0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zc3h3Q8CHP0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.29■□□□□ 0.68
Zc3h3Q8CHP0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Zc3h3Q8CHP0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Zc3h3Q8CHP0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
Zc3h3Q8CHP0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.29■□□□□ 0.68
Zc3h3Q8CHP0 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.29■□□□□ 0.68
Zc3h3Q8CHP0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zc3h3Q8CHP0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Zc3h3Q8CHP0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Zc3h3Q8CHP0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.28■□□□□ 0.68
Zc3h3Q8CHP0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zc3h3Q8CHP0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zc3h3Q8CHP0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.28■□□□□ 0.68
Zc3h3Q8CHP0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.28■□□□□ 0.68
Zc3h3Q8CHP0 Gm9987-201ENSMUST00000069768 567 ntBASIC19.28■□□□□ 0.68
Zc3h3Q8CHP0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zc3h3Q8CHP0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zc3h3Q8CHP0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Zc3h3Q8CHP0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Zc3h3Q8CHP0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Zc3h3Q8CHP0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Zc3h3Q8CHP0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Zc3h3Q8CHP0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Zc3h3Q8CHP0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Zc3h3Q8CHP0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Zc3h3Q8CHP0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Zc3h3Q8CHP0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.27■□□□□ 0.68
Zc3h3Q8CHP0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Zc3h3Q8CHP0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Zc3h3Q8CHP0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Zc3h3Q8CHP0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zc3h3Q8CHP0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zc3h3Q8CHP0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zc3h3Q8CHP0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Zc3h3Q8CHP0 Gm37055-201ENSMUST00000191866 133 ntBASIC19.26■□□□□ 0.67
Zc3h3Q8CHP0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zc3h3Q8CHP0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zc3h3Q8CHP0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zc3h3Q8CHP0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h3Q8CHP0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h3Q8CHP0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h3Q8CHP0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h3Q8CHP0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h3Q8CHP0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h3Q8CHP0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h3Q8CHP0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h3Q8CHP0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Zc3h3Q8CHP0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h3Q8CHP0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
Zc3h3Q8CHP0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Zc3h3Q8CHP0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h3Q8CHP0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Zc3h3Q8CHP0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h3Q8CHP0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h3Q8CHP0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h3Q8CHP0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
Zc3h3Q8CHP0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
Zc3h3Q8CHP0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h3Q8CHP0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Zc3h3Q8CHP0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Zc3h3Q8CHP0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h3Q8CHP0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h3Q8CHP0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Zc3h3Q8CHP0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zc3h3Q8CHP0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Zc3h3Q8CHP0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.23■□□□□ 0.67
Zc3h3Q8CHP0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h3Q8CHP0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.23■□□□□ 0.67
Zc3h3Q8CHP0 Gm2559-201ENSMUST00000201323 363 ntBASIC19.23■□□□□ 0.67
Zc3h3Q8CHP0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h3Q8CHP0 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.23■□□□□ 0.67
Zc3h3Q8CHP0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h3Q8CHP0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zc3h3Q8CHP0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h3Q8CHP0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h3Q8CHP0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zc3h3Q8CHP0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms