Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Rp1l1Q8CGM2 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rp1l1Q8CGM2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rp1l1Q8CGM2 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.7■□□□□ 0.9
Rp1l1Q8CGM2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.7■□□□□ 0.9
Rp1l1Q8CGM2 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.7■□□□□ 0.9
Rp1l1Q8CGM2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rp1l1Q8CGM2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Rp1l1Q8CGM2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rp1l1Q8CGM2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rp1l1Q8CGM2 Gm13836-201ENSMUST00000121159 501 ntBASIC20.69■□□□□ 0.9
Rp1l1Q8CGM2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rp1l1Q8CGM2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Rp1l1Q8CGM2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rp1l1Q8CGM2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rp1l1Q8CGM2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rp1l1Q8CGM2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rp1l1Q8CGM2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rp1l1Q8CGM2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.68■□□□□ 0.9
Rp1l1Q8CGM2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rp1l1Q8CGM2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rp1l1Q8CGM2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rp1l1Q8CGM2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Rp1l1Q8CGM2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Rp1l1Q8CGM2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Rp1l1Q8CGM2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.67■□□□□ 0.9
Rp1l1Q8CGM2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Rp1l1Q8CGM2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rp1l1Q8CGM2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rp1l1Q8CGM2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rp1l1Q8CGM2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rp1l1Q8CGM2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rp1l1Q8CGM2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rp1l1Q8CGM2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rp1l1Q8CGM2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rp1l1Q8CGM2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rp1l1Q8CGM2 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rp1l1Q8CGM2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rp1l1Q8CGM2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.66■□□□□ 0.9
Rp1l1Q8CGM2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rp1l1Q8CGM2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.66■□□□□ 0.9
Rp1l1Q8CGM2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.66■□□□□ 0.9
Rp1l1Q8CGM2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.66■□□□□ 0.9
Rp1l1Q8CGM2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rp1l1Q8CGM2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rp1l1Q8CGM2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rp1l1Q8CGM2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rp1l1Q8CGM2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.66■□□□□ 0.9
Rp1l1Q8CGM2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rp1l1Q8CGM2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rp1l1Q8CGM2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rp1l1Q8CGM2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.65■□□□□ 0.9
Rp1l1Q8CGM2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rp1l1Q8CGM2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rp1l1Q8CGM2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rp1l1Q8CGM2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rp1l1Q8CGM2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rp1l1Q8CGM2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rp1l1Q8CGM2 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.64■□□□□ 0.9
Rp1l1Q8CGM2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Rp1l1Q8CGM2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rp1l1Q8CGM2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rp1l1Q8CGM2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rp1l1Q8CGM2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rp1l1Q8CGM2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Rp1l1Q8CGM2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rp1l1Q8CGM2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rp1l1Q8CGM2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rp1l1Q8CGM2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rp1l1Q8CGM2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rp1l1Q8CGM2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rp1l1Q8CGM2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rp1l1Q8CGM2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rp1l1Q8CGM2 Gm5643-201ENSMUST00000117081 966 ntBASIC20.63■□□□□ 0.89
Rp1l1Q8CGM2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Rp1l1Q8CGM2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Rp1l1Q8CGM2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Rp1l1Q8CGM2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Rp1l1Q8CGM2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Rp1l1Q8CGM2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Rp1l1Q8CGM2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rp1l1Q8CGM2 Gm715-201ENSMUST00000117865 831 ntBASIC20.62■□□□□ 0.89
Rp1l1Q8CGM2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Rp1l1Q8CGM2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rp1l1Q8CGM2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rp1l1Q8CGM2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rp1l1Q8CGM2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rp1l1Q8CGM2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.62■□□□□ 0.89
Rp1l1Q8CGM2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rp1l1Q8CGM2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.62■□□□□ 0.89
Rp1l1Q8CGM2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rp1l1Q8CGM2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rp1l1Q8CGM2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Rp1l1Q8CGM2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.61■□□□□ 0.89
Rp1l1Q8CGM2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rp1l1Q8CGM2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rp1l1Q8CGM2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rp1l1Q8CGM2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rp1l1Q8CGM2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.6■□□□□ 0.89
Rp1l1Q8CGM2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms