Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Lsm11Q8BUV6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm11Q8BUV6 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lsm11Q8BUV6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm11Q8BUV6 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm11Q8BUV6 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Lsm11Q8BUV6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm11Q8BUV6 Mir6236-201ENSMUST00000184437 123 ntBASIC16.59■□□□□ 0.25
Lsm11Q8BUV6 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm11Q8BUV6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Lsm11Q8BUV6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lsm11Q8BUV6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lsm11Q8BUV6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lsm11Q8BUV6 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.58■□□□□ 0.25
Lsm11Q8BUV6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lsm11Q8BUV6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lsm11Q8BUV6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lsm11Q8BUV6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Lsm11Q8BUV6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Lsm11Q8BUV6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lsm11Q8BUV6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lsm11Q8BUV6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm11Q8BUV6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Lsm11Q8BUV6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm11Q8BUV6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm11Q8BUV6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm11Q8BUV6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.57■□□□□ 0.24
Lsm11Q8BUV6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Lsm11Q8BUV6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.57■□□□□ 0.24
Lsm11Q8BUV6 Gm5921-201ENSMUST00000075898 882 ntBASIC16.57■□□□□ 0.24
Lsm11Q8BUV6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm11Q8BUV6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm11Q8BUV6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm11Q8BUV6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm11Q8BUV6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm11Q8BUV6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Lsm11Q8BUV6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm11Q8BUV6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm11Q8BUV6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm11Q8BUV6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm11Q8BUV6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm11Q8BUV6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm11Q8BUV6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Lsm11Q8BUV6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Lsm11Q8BUV6 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm11Q8BUV6 Gm10232-201ENSMUST00000089221 720 ntBASIC16.56■□□□□ 0.24
Lsm11Q8BUV6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm11Q8BUV6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm11Q8BUV6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm11Q8BUV6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm11Q8BUV6 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm11Q8BUV6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm11Q8BUV6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm11Q8BUV6 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm11Q8BUV6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm11Q8BUV6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.55■□□□□ 0.24
Lsm11Q8BUV6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm11Q8BUV6 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm11Q8BUV6 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm11Q8BUV6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm11Q8BUV6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Lsm11Q8BUV6 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Lsm11Q8BUV6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm11Q8BUV6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm11Q8BUV6 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Lsm11Q8BUV6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm11Q8BUV6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm11Q8BUV6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm11Q8BUV6 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm11Q8BUV6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.54■□□□□ 0.24
Lsm11Q8BUV6 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm11Q8BUV6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Lsm11Q8BUV6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.54■□□□□ 0.24
Lsm11Q8BUV6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm11Q8BUV6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm11Q8BUV6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm11Q8BUV6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.54■□□□□ 0.24
Lsm11Q8BUV6 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm11Q8BUV6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm11Q8BUV6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm11Q8BUV6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm11Q8BUV6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm11Q8BUV6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm11Q8BUV6 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm11Q8BUV6 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm11Q8BUV6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm11Q8BUV6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm11Q8BUV6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.52■□□□□ 0.24
Lsm11Q8BUV6 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm11Q8BUV6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Lsm11Q8BUV6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm11Q8BUV6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
Lsm11Q8BUV6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm11Q8BUV6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.52■□□□□ 0.24
Lsm11Q8BUV6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm11Q8BUV6 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm11Q8BUV6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm11Q8BUV6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm11Q8BUV6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm11Q8BUV6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms