Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sfr1Q8BP27 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sfr1Q8BP27 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sfr1Q8BP27 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Sfr1Q8BP27 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sfr1Q8BP27 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sfr1Q8BP27 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sfr1Q8BP27 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sfr1Q8BP27 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sfr1Q8BP27 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sfr1Q8BP27 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sfr1Q8BP27 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sfr1Q8BP27 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sfr1Q8BP27 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
Sfr1Q8BP27 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sfr1Q8BP27 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sfr1Q8BP27 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Sfr1Q8BP27 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sfr1Q8BP27 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sfr1Q8BP27 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sfr1Q8BP27 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sfr1Q8BP27 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sfr1Q8BP27 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.79■□□□□ 0.76
Sfr1Q8BP27 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sfr1Q8BP27 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sfr1Q8BP27 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Sfr1Q8BP27 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sfr1Q8BP27 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sfr1Q8BP27 Serp2-204ENSMUST00000228055 705 ntBASIC19.79■□□□□ 0.76
Sfr1Q8BP27 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sfr1Q8BP27 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sfr1Q8BP27 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sfr1Q8BP27 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Sfr1Q8BP27 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sfr1Q8BP27 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sfr1Q8BP27 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sfr1Q8BP27 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sfr1Q8BP27 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.78■□□□□ 0.76
Sfr1Q8BP27 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sfr1Q8BP27 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sfr1Q8BP27 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sfr1Q8BP27 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Sfr1Q8BP27 Smad6-203ENSMUST00000179458 273 ntBASIC19.78■□□□□ 0.76
Sfr1Q8BP27 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sfr1Q8BP27 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sfr1Q8BP27 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sfr1Q8BP27 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sfr1Q8BP27 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.77■□□□□ 0.76
Sfr1Q8BP27 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Sfr1Q8BP27 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sfr1Q8BP27 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sfr1Q8BP27 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sfr1Q8BP27 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sfr1Q8BP27 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sfr1Q8BP27 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Sfr1Q8BP27 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Sfr1Q8BP27 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Sfr1Q8BP27 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sfr1Q8BP27 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sfr1Q8BP27 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sfr1Q8BP27 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.76■□□□□ 0.75
Sfr1Q8BP27 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Sfr1Q8BP27 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sfr1Q8BP27 Gm26833-201ENSMUST00000180899 440 ntBASIC19.76■□□□□ 0.75
Sfr1Q8BP27 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.76■□□□□ 0.75
Sfr1Q8BP27 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.76■□□□□ 0.75
Sfr1Q8BP27 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.76■□□□□ 0.75
Sfr1Q8BP27 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sfr1Q8BP27 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.76■□□□□ 0.75
Sfr1Q8BP27 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sfr1Q8BP27 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sfr1Q8BP27 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sfr1Q8BP27 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sfr1Q8BP27 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.75■□□□□ 0.75
Sfr1Q8BP27 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sfr1Q8BP27 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Sfr1Q8BP27 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sfr1Q8BP27 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.75■□□□□ 0.75
Sfr1Q8BP27 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Sfr1Q8BP27 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sfr1Q8BP27 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sfr1Q8BP27 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sfr1Q8BP27 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sfr1Q8BP27 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sfr1Q8BP27 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sfr1Q8BP27 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sfr1Q8BP27 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sfr1Q8BP27 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Sfr1Q8BP27 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sfr1Q8BP27 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sfr1Q8BP27 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Sfr1Q8BP27 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sfr1Q8BP27 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sfr1Q8BP27 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Sfr1Q8BP27 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.73■□□□□ 0.75
Sfr1Q8BP27 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sfr1Q8BP27 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sfr1Q8BP27 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sfr1Q8BP27 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sfr1Q8BP27 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms