Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdkl3Q8BLF2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdkl3Q8BLF2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Cdkl3Q8BLF2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.85■□□□□ 0.29
Cdkl3Q8BLF2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdkl3Q8BLF2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.84■□□□□ 0.29
Cdkl3Q8BLF2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cdkl3Q8BLF2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdkl3Q8BLF2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdkl3Q8BLF2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdkl3Q8BLF2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC16.84■□□□□ 0.29
Cdkl3Q8BLF2 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.84■□□□□ 0.29
Cdkl3Q8BLF2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdkl3Q8BLF2 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.84■□□□□ 0.29
Cdkl3Q8BLF2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdkl3Q8BLF2 Grk6-206ENSMUST00000224995 2971 ntBASIC16.84■□□□□ 0.29
Cdkl3Q8BLF2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdkl3Q8BLF2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cdkl3Q8BLF2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdkl3Q8BLF2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdkl3Q8BLF2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cdkl3Q8BLF2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Cdkl3Q8BLF2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdkl3Q8BLF2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdkl3Q8BLF2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdkl3Q8BLF2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdkl3Q8BLF2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Cdkl3Q8BLF2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdkl3Q8BLF2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdkl3Q8BLF2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdkl3Q8BLF2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdkl3Q8BLF2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdkl3Q8BLF2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdkl3Q8BLF2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.82■□□□□ 0.28
Cdkl3Q8BLF2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cdkl3Q8BLF2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdkl3Q8BLF2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdkl3Q8BLF2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdkl3Q8BLF2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdkl3Q8BLF2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdkl3Q8BLF2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdkl3Q8BLF2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdkl3Q8BLF2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cdkl3Q8BLF2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Cdkl3Q8BLF2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cdkl3Q8BLF2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdkl3Q8BLF2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdkl3Q8BLF2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.81■□□□□ 0.28
Cdkl3Q8BLF2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdkl3Q8BLF2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.81■□□□□ 0.28
Cdkl3Q8BLF2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdkl3Q8BLF2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdkl3Q8BLF2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdkl3Q8BLF2 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.81■□□□□ 0.28
Cdkl3Q8BLF2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdkl3Q8BLF2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdkl3Q8BLF2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cdkl3Q8BLF2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.8■□□□□ 0.28
Cdkl3Q8BLF2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cdkl3Q8BLF2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdkl3Q8BLF2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Cdkl3Q8BLF2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdkl3Q8BLF2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Cdkl3Q8BLF2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.8■□□□□ 0.28
Cdkl3Q8BLF2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Cdkl3Q8BLF2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdkl3Q8BLF2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdkl3Q8BLF2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cdkl3Q8BLF2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdkl3Q8BLF2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdkl3Q8BLF2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdkl3Q8BLF2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdkl3Q8BLF2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cdkl3Q8BLF2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdkl3Q8BLF2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.79■□□□□ 0.28
Cdkl3Q8BLF2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Cdkl3Q8BLF2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdkl3Q8BLF2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdkl3Q8BLF2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cdkl3Q8BLF2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdkl3Q8BLF2 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.79■□□□□ 0.28
Cdkl3Q8BLF2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdkl3Q8BLF2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cdkl3Q8BLF2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdkl3Q8BLF2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdkl3Q8BLF2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdkl3Q8BLF2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdkl3Q8BLF2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdkl3Q8BLF2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdkl3Q8BLF2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cdkl3Q8BLF2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdkl3Q8BLF2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.78■□□□□ 0.28
Cdkl3Q8BLF2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdkl3Q8BLF2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Cdkl3Q8BLF2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdkl3Q8BLF2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdkl3Q8BLF2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdkl3Q8BLF2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.78■□□□□ 0.28
Cdkl3Q8BLF2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdkl3Q8BLF2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms