Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp1Q8BJQ2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Usp1Q8BJQ2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Usp1Q8BJQ2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Usp1Q8BJQ2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Usp1Q8BJQ2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Usp1Q8BJQ2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp1Q8BJQ2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp1Q8BJQ2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp1Q8BJQ2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp1Q8BJQ2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp1Q8BJQ2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp1Q8BJQ2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp1Q8BJQ2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Usp1Q8BJQ2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp1Q8BJQ2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp1Q8BJQ2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp1Q8BJQ2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp1Q8BJQ2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp1Q8BJQ2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.75■□□□□ 0.91
Usp1Q8BJQ2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.75■□□□□ 0.91
Usp1Q8BJQ2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp1Q8BJQ2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp1Q8BJQ2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp1Q8BJQ2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Usp1Q8BJQ2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp1Q8BJQ2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.74■□□□□ 0.91
Usp1Q8BJQ2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Usp1Q8BJQ2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.74■□□□□ 0.91
Usp1Q8BJQ2 Reep4-203ENSMUST00000226563 1444 ntBASIC20.74■□□□□ 0.91
Usp1Q8BJQ2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp1Q8BJQ2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp1Q8BJQ2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.74■□□□□ 0.91
Usp1Q8BJQ2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp1Q8BJQ2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Usp1Q8BJQ2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp1Q8BJQ2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp1Q8BJQ2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp1Q8BJQ2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Usp1Q8BJQ2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.73■□□□□ 0.91
Usp1Q8BJQ2 Gm10602-201ENSMUST00000098239 609 ntBASIC20.73■□□□□ 0.91
Usp1Q8BJQ2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Usp1Q8BJQ2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Usp1Q8BJQ2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
Usp1Q8BJQ2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp1Q8BJQ2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp1Q8BJQ2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Usp1Q8BJQ2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp1Q8BJQ2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Usp1Q8BJQ2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Usp1Q8BJQ2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Usp1Q8BJQ2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp1Q8BJQ2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Usp1Q8BJQ2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp1Q8BJQ2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp1Q8BJQ2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Usp1Q8BJQ2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp1Q8BJQ2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp1Q8BJQ2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp1Q8BJQ2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp1Q8BJQ2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp1Q8BJQ2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp1Q8BJQ2 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.71■□□□□ 0.91
Usp1Q8BJQ2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp1Q8BJQ2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Usp1Q8BJQ2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Usp1Q8BJQ2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Usp1Q8BJQ2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Usp1Q8BJQ2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp1Q8BJQ2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp1Q8BJQ2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Usp1Q8BJQ2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.7■□□□□ 0.9
Usp1Q8BJQ2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Usp1Q8BJQ2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp1Q8BJQ2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp1Q8BJQ2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp1Q8BJQ2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp1Q8BJQ2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp1Q8BJQ2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp1Q8BJQ2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Usp1Q8BJQ2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Usp1Q8BJQ2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp1Q8BJQ2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Usp1Q8BJQ2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp1Q8BJQ2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp1Q8BJQ2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Usp1Q8BJQ2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp1Q8BJQ2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp1Q8BJQ2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp1Q8BJQ2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usp1Q8BJQ2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usp1Q8BJQ2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usp1Q8BJQ2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usp1Q8BJQ2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.68■□□□□ 0.9
Usp1Q8BJQ2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp1Q8BJQ2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp1Q8BJQ2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp1Q8BJQ2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp1Q8BJQ2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp1Q8BJQ2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 142.3 ms