Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp2bQ8BJF9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp2bQ8BJF9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp2bQ8BJF9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp2bQ8BJF9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp2bQ8BJF9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp2bQ8BJF9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp2bQ8BJF9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp2bQ8BJF9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Chmp2bQ8BJF9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp2bQ8BJF9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Chmp2bQ8BJF9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp2bQ8BJF9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp2bQ8BJF9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp2bQ8BJF9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp2bQ8BJF9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp2bQ8BJF9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp2bQ8BJF9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp2bQ8BJF9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
Chmp2bQ8BJF9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.91■□□□□ 0.78
Chmp2bQ8BJF9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Chmp2bQ8BJF9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp2bQ8BJF9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp2bQ8BJF9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp2bQ8BJF9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp2bQ8BJF9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.9■□□□□ 0.78
Chmp2bQ8BJF9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.9■□□□□ 0.78
Chmp2bQ8BJF9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp2bQ8BJF9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp2bQ8BJF9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.9■□□□□ 0.78
Chmp2bQ8BJF9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp2bQ8BJF9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.89■□□□□ 0.77
Chmp2bQ8BJF9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp2bQ8BJF9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp2bQ8BJF9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.89■□□□□ 0.77
Chmp2bQ8BJF9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp2bQ8BJF9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp2bQ8BJF9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp2bQ8BJF9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp2bQ8BJF9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp2bQ8BJF9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp2bQ8BJF9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp2bQ8BJF9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp2bQ8BJF9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp2bQ8BJF9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp2bQ8BJF9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.88■□□□□ 0.77
Chmp2bQ8BJF9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp2bQ8BJF9 Gm15546-201ENSMUST00000122095 826 ntBASIC19.88■□□□□ 0.77
Chmp2bQ8BJF9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp2bQ8BJF9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp2bQ8BJF9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp2bQ8BJF9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp2bQ8BJF9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp2bQ8BJF9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp2bQ8BJF9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp2bQ8BJF9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Chmp2bQ8BJF9 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.87■□□□□ 0.77
Chmp2bQ8BJF9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Chmp2bQ8BJF9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.87■□□□□ 0.77
Chmp2bQ8BJF9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Chmp2bQ8BJF9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp2bQ8BJF9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp2bQ8BJF9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp2bQ8BJF9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp2bQ8BJF9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.87■□□□□ 0.77
Chmp2bQ8BJF9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp2bQ8BJF9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp2bQ8BJF9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp2bQ8BJF9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Chmp2bQ8BJF9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp2bQ8BJF9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp2bQ8BJF9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.86■□□□□ 0.77
Chmp2bQ8BJF9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp2bQ8BJF9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp2bQ8BJF9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp2bQ8BJF9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp2bQ8BJF9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp2bQ8BJF9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp2bQ8BJF9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp2bQ8BJF9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp2bQ8BJF9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp2bQ8BJF9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp2bQ8BJF9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp2bQ8BJF9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp2bQ8BJF9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp2bQ8BJF9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp2bQ8BJF9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp2bQ8BJF9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp2bQ8BJF9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.85■□□□□ 0.77
Chmp2bQ8BJF9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp2bQ8BJF9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp2bQ8BJF9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp2bQ8BJF9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp2bQ8BJF9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.83■□□□□ 0.77
Chmp2bQ8BJF9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp2bQ8BJF9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp2bQ8BJF9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp2bQ8BJF9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp2bQ8BJF9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp2bQ8BJF9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms