Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.58■□□□□ 0.89
Nod1Q8BHB0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nod1Q8BHB0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nod1Q8BHB0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nod1Q8BHB0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.58■□□□□ 0.89
Nod1Q8BHB0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nod1Q8BHB0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nod1Q8BHB0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nod1Q8BHB0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nod1Q8BHB0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Nod1Q8BHB0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nod1Q8BHB0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Nod1Q8BHB0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nod1Q8BHB0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.57■□□□□ 0.88
Nod1Q8BHB0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nod1Q8BHB0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nod1Q8BHB0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nod1Q8BHB0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nod1Q8BHB0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nod1Q8BHB0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Nod1Q8BHB0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nod1Q8BHB0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nod1Q8BHB0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.56■□□□□ 0.88
Nod1Q8BHB0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nod1Q8BHB0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nod1Q8BHB0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nod1Q8BHB0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nod1Q8BHB0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nod1Q8BHB0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nod1Q8BHB0 Mir5133-201ENSMUST00000174955 77 ntBASIC20.56■□□□□ 0.88
Nod1Q8BHB0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nod1Q8BHB0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nod1Q8BHB0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nod1Q8BHB0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nod1Q8BHB0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nod1Q8BHB0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nod1Q8BHB0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Nod1Q8BHB0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nod1Q8BHB0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nod1Q8BHB0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nod1Q8BHB0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nod1Q8BHB0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nod1Q8BHB0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Nod1Q8BHB0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nod1Q8BHB0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nod1Q8BHB0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nod1Q8BHB0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nod1Q8BHB0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nod1Q8BHB0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nod1Q8BHB0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.54■□□□□ 0.88
Nod1Q8BHB0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.54■□□□□ 0.88
Nod1Q8BHB0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nod1Q8BHB0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nod1Q8BHB0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nod1Q8BHB0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.53■□□□□ 0.88
Nod1Q8BHB0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nod1Q8BHB0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Nod1Q8BHB0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Nod1Q8BHB0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Nod1Q8BHB0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nod1Q8BHB0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nod1Q8BHB0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nod1Q8BHB0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nod1Q8BHB0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Nod1Q8BHB0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.52■□□□□ 0.88
Nod1Q8BHB0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.52■□□□□ 0.88
Nod1Q8BHB0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nod1Q8BHB0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.52■□□□□ 0.88
Nod1Q8BHB0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.52■□□□□ 0.88
Nod1Q8BHB0 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.52■□□□□ 0.88
Nod1Q8BHB0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Nod1Q8BHB0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nod1Q8BHB0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Nod1Q8BHB0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Nod1Q8BHB0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nod1Q8BHB0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Nod1Q8BHB0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nod1Q8BHB0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nod1Q8BHB0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nod1Q8BHB0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nod1Q8BHB0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nod1Q8BHB0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.51■□□□□ 0.87
Nod1Q8BHB0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.51■□□□□ 0.87
Nod1Q8BHB0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.51■□□□□ 0.87
Nod1Q8BHB0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.51■□□□□ 0.87
Nod1Q8BHB0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nod1Q8BHB0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.51■□□□□ 0.87
Nod1Q8BHB0 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.51■□□□□ 0.87
Nod1Q8BHB0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nod1Q8BHB0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Nod1Q8BHB0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nod1Q8BHB0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nod1Q8BHB0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nod1Q8BHB0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nod1Q8BHB0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nod1Q8BHB0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nod1Q8BHB0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nod1Q8BHB0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nod1Q8BHB0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nod1Q8BHB0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms