Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.2■□□□□ 0.98
Depdc1bQ8BH88 Mir7075-201ENSMUST00000184187 82 ntBASIC21.2■□□□□ 0.98
Depdc1bQ8BH88 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Depdc1bQ8BH88 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Depdc1bQ8BH88 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Depdc1bQ8BH88 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Depdc1bQ8BH88 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Depdc1bQ8BH88 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.2■□□□□ 0.98
Depdc1bQ8BH88 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Depdc1bQ8BH88 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Depdc1bQ8BH88 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Depdc1bQ8BH88 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Depdc1bQ8BH88 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Depdc1bQ8BH88 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Depdc1bQ8BH88 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Depdc1bQ8BH88 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Depdc1bQ8BH88 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Depdc1bQ8BH88 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.19■□□□□ 0.98
Depdc1bQ8BH88 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Depdc1bQ8BH88 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Depdc1bQ8BH88 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Depdc1bQ8BH88 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Depdc1bQ8BH88 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.18■□□□□ 0.98
Depdc1bQ8BH88 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Depdc1bQ8BH88 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.18■□□□□ 0.98
Depdc1bQ8BH88 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Depdc1bQ8BH88 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Depdc1bQ8BH88 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Depdc1bQ8BH88 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Depdc1bQ8BH88 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Depdc1bQ8BH88 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Depdc1bQ8BH88 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Depdc1bQ8BH88 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Depdc1bQ8BH88 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Depdc1bQ8BH88 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Depdc1bQ8BH88 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Depdc1bQ8BH88 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.17■□□□□ 0.98
Depdc1bQ8BH88 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Depdc1bQ8BH88 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Depdc1bQ8BH88 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Depdc1bQ8BH88 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Depdc1bQ8BH88 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Depdc1bQ8BH88 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Depdc1bQ8BH88 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Depdc1bQ8BH88 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Depdc1bQ8BH88 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.16■□□□□ 0.98
Depdc1bQ8BH88 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Depdc1bQ8BH88 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.16■□□□□ 0.98
Depdc1bQ8BH88 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Depdc1bQ8BH88 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Depdc1bQ8BH88 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Depdc1bQ8BH88 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Depdc1bQ8BH88 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.15■□□□□ 0.98
Depdc1bQ8BH88 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Depdc1bQ8BH88 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Depdc1bQ8BH88 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Depdc1bQ8BH88 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Depdc1bQ8BH88 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.14■□□□□ 0.98
Depdc1bQ8BH88 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Depdc1bQ8BH88 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Depdc1bQ8BH88 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC21.14■□□□□ 0.97
Depdc1bQ8BH88 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Depdc1bQ8BH88 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Depdc1bQ8BH88 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.14■□□□□ 0.97
Depdc1bQ8BH88 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
Depdc1bQ8BH88 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.14■□□□□ 0.97
Depdc1bQ8BH88 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Depdc1bQ8BH88 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.14■□□□□ 0.97
Depdc1bQ8BH88 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Depdc1bQ8BH88 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Depdc1bQ8BH88 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Depdc1bQ8BH88 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Depdc1bQ8BH88 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.13■□□□□ 0.97
Depdc1bQ8BH88 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Depdc1bQ8BH88 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Depdc1bQ8BH88 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
Depdc1bQ8BH88 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Depdc1bQ8BH88 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Depdc1bQ8BH88 Gm8493-201ENSMUST00000196881 489 ntBASIC21.13■□□□□ 0.97
Depdc1bQ8BH88 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.13■□□□□ 0.97
Depdc1bQ8BH88 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Depdc1bQ8BH88 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Depdc1bQ8BH88 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Depdc1bQ8BH88 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Depdc1bQ8BH88 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Depdc1bQ8BH88 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Depdc1bQ8BH88 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Depdc1bQ8BH88 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Depdc1bQ8BH88 Golph3-202ENSMUST00000226517 2359 ntBASIC21.12■□□□□ 0.97
Depdc1bQ8BH88 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Depdc1bQ8BH88 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Depdc1bQ8BH88 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Depdc1bQ8BH88 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Depdc1bQ8BH88 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Depdc1bQ8BH88 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Depdc1bQ8BH88 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Depdc1bQ8BH88 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.12■□□□□ 0.97
Depdc1bQ8BH88 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Depdc1bQ8BH88 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Depdc1bQ8BH88 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms