Protein–RNA interactions for Protein: Q8BGB5

Limd2, LIM domain-containing protein 2, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limd2Q8BGB5 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Limd2Q8BGB5 Gm43548-201ENSMUST00000197139 2353 ntBASIC10.72□□□□□ -0.69
Limd2Q8BGB5 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Limd2Q8BGB5 Gm5913-201ENSMUST00000119397 1399 ntBASIC10.71□□□□□ -0.69
Limd2Q8BGB5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Limd2Q8BGB5 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Limd2Q8BGB5 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC10.71□□□□□ -0.69
Limd2Q8BGB5 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Limd2Q8BGB5 Gm5987-201ENSMUST00000196433 1151 ntBASIC10.71□□□□□ -0.69
Limd2Q8BGB5 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.69
Limd2Q8BGB5 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Limd2Q8BGB5 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Limd2Q8BGB5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Limd2Q8BGB5 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Limd2Q8BGB5 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Limd2Q8BGB5 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Limd2Q8BGB5 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.7
Limd2Q8BGB5 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Limd2Q8BGB5 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Limd2Q8BGB5 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Limd2Q8BGB5 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Limd2Q8BGB5 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Limd2Q8BGB5 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Limd2Q8BGB5 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Limd2Q8BGB5 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Limd2Q8BGB5 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Limd2Q8BGB5 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC10.7□□□□□ -0.7
Limd2Q8BGB5 Gm43231-201ENSMUST00000202960 2258 ntBASIC10.7□□□□□ -0.7
Limd2Q8BGB5 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Limd2Q8BGB5 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Limd2Q8BGB5 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Limd2Q8BGB5 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Limd2Q8BGB5 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC10.7□□□□□ -0.7
Limd2Q8BGB5 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Limd2Q8BGB5 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Limd2Q8BGB5 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Limd2Q8BGB5 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Limd2Q8BGB5 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Limd2Q8BGB5 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
Limd2Q8BGB5 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Limd2Q8BGB5 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Limd2Q8BGB5 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Limd2Q8BGB5 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Limd2Q8BGB5 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Limd2Q8BGB5 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Limd2Q8BGB5 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Limd2Q8BGB5 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Limd2Q8BGB5 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Limd2Q8BGB5 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC10.69□□□□□ -0.7
Limd2Q8BGB5 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Limd2Q8BGB5 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Limd2Q8BGB5 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Limd2Q8BGB5 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Limd2Q8BGB5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC10.67□□□□□ -0.7
Limd2Q8BGB5 Gm37035-201ENSMUST00000194809 2148 ntBASIC10.67□□□□□ -0.7
Limd2Q8BGB5 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Limd2Q8BGB5 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Limd2Q8BGB5 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Limd2Q8BGB5 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Limd2Q8BGB5 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Limd2Q8BGB5 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Limd2Q8BGB5 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Limd2Q8BGB5 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Limd2Q8BGB5 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Limd2Q8BGB5 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC10.67□□□□□ -0.7
Limd2Q8BGB5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Limd2Q8BGB5 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms