Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Trnp1Q80ZI1 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC22.33■■□□□ 1.17
Trnp1Q80ZI1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Trnp1Q80ZI1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trnp1Q80ZI1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC22.32■■□□□ 1.16
Trnp1Q80ZI1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trnp1Q80ZI1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trnp1Q80ZI1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trnp1Q80ZI1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trnp1Q80ZI1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trnp1Q80ZI1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trnp1Q80ZI1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trnp1Q80ZI1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Trnp1Q80ZI1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trnp1Q80ZI1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
Trnp1Q80ZI1 Gm29241-201ENSMUST00000189260 1096 ntBASIC22.31■■□□□ 1.16
Trnp1Q80ZI1 Gm44672-201ENSMUST00000206944 1098 ntBASIC22.31■■□□□ 1.16
Trnp1Q80ZI1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC22.31■■□□□ 1.16
Trnp1Q80ZI1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trnp1Q80ZI1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trnp1Q80ZI1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Trnp1Q80ZI1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Trnp1Q80ZI1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Trnp1Q80ZI1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trnp1Q80ZI1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Trnp1Q80ZI1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trnp1Q80ZI1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC22.29■■□□□ 1.16
Trnp1Q80ZI1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trnp1Q80ZI1 Rab3c-203ENSMUST00000224180 967 ntBASIC22.29■■□□□ 1.16
Trnp1Q80ZI1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC22.29■■□□□ 1.16
Trnp1Q80ZI1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trnp1Q80ZI1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trnp1Q80ZI1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trnp1Q80ZI1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trnp1Q80ZI1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trnp1Q80ZI1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Trnp1Q80ZI1 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.29■■□□□ 1.16
Trnp1Q80ZI1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trnp1Q80ZI1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
Trnp1Q80ZI1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trnp1Q80ZI1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC22.28■■□□□ 1.16
Trnp1Q80ZI1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trnp1Q80ZI1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC22.28■■□□□ 1.16
Trnp1Q80ZI1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trnp1Q80ZI1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trnp1Q80ZI1 AC135963.1-201ENSMUST00000211640 717 ntBASIC22.27■■□□□ 1.16
Trnp1Q80ZI1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trnp1Q80ZI1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Trnp1Q80ZI1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Trnp1Q80ZI1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trnp1Q80ZI1 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trnp1Q80ZI1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trnp1Q80ZI1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trnp1Q80ZI1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Trnp1Q80ZI1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Trnp1Q80ZI1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trnp1Q80ZI1 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trnp1Q80ZI1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC22.26■■□□□ 1.15
Trnp1Q80ZI1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Trnp1Q80ZI1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Trnp1Q80ZI1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trnp1Q80ZI1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trnp1Q80ZI1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trnp1Q80ZI1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trnp1Q80ZI1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Trnp1Q80ZI1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Trnp1Q80ZI1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Trnp1Q80ZI1 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC22.25■■□□□ 1.15
Trnp1Q80ZI1 AC154266.1-201ENSMUST00000223190 503 ntBASIC22.25■■□□□ 1.15
Trnp1Q80ZI1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trnp1Q80ZI1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trnp1Q80ZI1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.24■■□□□ 1.15
Trnp1Q80ZI1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Trnp1Q80ZI1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trnp1Q80ZI1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Trnp1Q80ZI1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC22.24■■□□□ 1.15
Trnp1Q80ZI1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Trnp1Q80ZI1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC22.24■■□□□ 1.15
Trnp1Q80ZI1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Trnp1Q80ZI1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trnp1Q80ZI1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trnp1Q80ZI1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trnp1Q80ZI1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Trnp1Q80ZI1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Trnp1Q80ZI1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trnp1Q80ZI1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trnp1Q80ZI1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Trnp1Q80ZI1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trnp1Q80ZI1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Trnp1Q80ZI1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Trnp1Q80ZI1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Trnp1Q80ZI1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trnp1Q80ZI1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
Trnp1Q80ZI1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trnp1Q80ZI1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trnp1Q80ZI1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Trnp1Q80ZI1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trnp1Q80ZI1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trnp1Q80ZI1 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Trnp1Q80ZI1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms