Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh19Q80TF3 Gm9988-201ENSMUST00000069786 435 ntBASIC19.19■□□□□ 0.66
Pcdh19Q80TF3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh19Q80TF3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.19■□□□□ 0.66
Pcdh19Q80TF3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh19Q80TF3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh19Q80TF3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh19Q80TF3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Pcdh19Q80TF3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh19Q80TF3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh19Q80TF3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Pcdh19Q80TF3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh19Q80TF3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh19Q80TF3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh19Q80TF3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.18■□□□□ 0.66
Pcdh19Q80TF3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
Pcdh19Q80TF3 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.18■□□□□ 0.66
Pcdh19Q80TF3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh19Q80TF3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh19Q80TF3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh19Q80TF3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdh19Q80TF3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh19Q80TF3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh19Q80TF3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh19Q80TF3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.17■□□□□ 0.66
Pcdh19Q80TF3 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.17■□□□□ 0.66
Pcdh19Q80TF3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh19Q80TF3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh19Q80TF3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh19Q80TF3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh19Q80TF3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh19Q80TF3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.16■□□□□ 0.66
Pcdh19Q80TF3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Pcdh19Q80TF3 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.16■□□□□ 0.66
Pcdh19Q80TF3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh19Q80TF3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh19Q80TF3 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.16■□□□□ 0.66
Pcdh19Q80TF3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh19Q80TF3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh19Q80TF3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh19Q80TF3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh19Q80TF3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh19Q80TF3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh19Q80TF3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.15■□□□□ 0.66
Pcdh19Q80TF3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.15■□□□□ 0.66
Pcdh19Q80TF3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh19Q80TF3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh19Q80TF3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh19Q80TF3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.15■□□□□ 0.66
Pcdh19Q80TF3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh19Q80TF3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh19Q80TF3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh19Q80TF3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh19Q80TF3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh19Q80TF3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh19Q80TF3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.14■□□□□ 0.65
Pcdh19Q80TF3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Pcdh19Q80TF3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh19Q80TF3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Pcdh19Q80TF3 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.14■□□□□ 0.65
Pcdh19Q80TF3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh19Q80TF3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh19Q80TF3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh19Q80TF3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh19Q80TF3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Pcdh19Q80TF3 Gm26571-201ENSMUST00000181399 666 ntBASIC19.13■□□□□ 0.65
Pcdh19Q80TF3 Gm7291-201ENSMUST00000199147 382 ntBASIC19.13■□□□□ 0.65
Pcdh19Q80TF3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.13■□□□□ 0.65
Pcdh19Q80TF3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh19Q80TF3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh19Q80TF3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh19Q80TF3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh19Q80TF3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh19Q80TF3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh19Q80TF3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Pcdh19Q80TF3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh19Q80TF3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh19Q80TF3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh19Q80TF3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh19Q80TF3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh19Q80TF3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh19Q80TF3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh19Q80TF3 Gm27405-201ENSMUST00000184201 112 ntBASIC19.12■□□□□ 0.65
Pcdh19Q80TF3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.12■□□□□ 0.65
Pcdh19Q80TF3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh19Q80TF3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.12■□□□□ 0.65
Pcdh19Q80TF3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh19Q80TF3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh19Q80TF3 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.12■□□□□ 0.65
Pcdh19Q80TF3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Pcdh19Q80TF3 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.12■□□□□ 0.65
Pcdh19Q80TF3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Pcdh19Q80TF3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.11■□□□□ 0.65
Pcdh19Q80TF3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh19Q80TF3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Pcdh19Q80TF3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh19Q80TF3 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.11■□□□□ 0.65
Pcdh19Q80TF3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh19Q80TF3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh19Q80TF3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms