Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf38bQ80SY5 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Prpf38bQ80SY5 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf38bQ80SY5 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf38bQ80SY5 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prpf38bQ80SY5 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Prpf38bQ80SY5 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Prpf38bQ80SY5 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.33■□□□□ 0.85
Prpf38bQ80SY5 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
Prpf38bQ80SY5 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Prpf38bQ80SY5 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Prpf38bQ80SY5 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Prpf38bQ80SY5 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Prpf38bQ80SY5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
Prpf38bQ80SY5 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.33■□□□□ 0.84
Prpf38bQ80SY5 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf38bQ80SY5 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf38bQ80SY5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf38bQ80SY5 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf38bQ80SY5 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Prpf38bQ80SY5 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf38bQ80SY5 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf38bQ80SY5 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf38bQ80SY5 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.32■□□□□ 0.84
Prpf38bQ80SY5 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.32■□□□□ 0.84
Prpf38bQ80SY5 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf38bQ80SY5 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Prpf38bQ80SY5 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.31■□□□□ 0.84
Prpf38bQ80SY5 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf38bQ80SY5 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf38bQ80SY5 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf38bQ80SY5 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.31■□□□□ 0.84
Prpf38bQ80SY5 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Prpf38bQ80SY5 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.31■□□□□ 0.84
Prpf38bQ80SY5 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.31■□□□□ 0.84
Prpf38bQ80SY5 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf38bQ80SY5 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf38bQ80SY5 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
Prpf38bQ80SY5 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prpf38bQ80SY5 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf38bQ80SY5 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf38bQ80SY5 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf38bQ80SY5 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.3■□□□□ 0.84
Prpf38bQ80SY5 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf38bQ80SY5 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Prpf38bQ80SY5 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Prpf38bQ80SY5 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf38bQ80SY5 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.3■□□□□ 0.84
Prpf38bQ80SY5 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf38bQ80SY5 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf38bQ80SY5 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf38bQ80SY5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf38bQ80SY5 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prpf38bQ80SY5 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prpf38bQ80SY5 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prpf38bQ80SY5 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prpf38bQ80SY5 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Prpf38bQ80SY5 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.29■□□□□ 0.84
Prpf38bQ80SY5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Prpf38bQ80SY5 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prpf38bQ80SY5 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.29■□□□□ 0.84
Prpf38bQ80SY5 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Prpf38bQ80SY5 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.29■□□□□ 0.84
Prpf38bQ80SY5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prpf38bQ80SY5 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf38bQ80SY5 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf38bQ80SY5 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf38bQ80SY5 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf38bQ80SY5 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.28■□□□□ 0.84
Prpf38bQ80SY5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf38bQ80SY5 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Prpf38bQ80SY5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf38bQ80SY5 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf38bQ80SY5 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf38bQ80SY5 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.27■□□□□ 0.84
Prpf38bQ80SY5 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prpf38bQ80SY5 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.27■□□□□ 0.84
Prpf38bQ80SY5 Gm4968-201ENSMUST00000071458 858 ntBASIC20.27■□□□□ 0.84
Prpf38bQ80SY5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prpf38bQ80SY5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prpf38bQ80SY5 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Prpf38bQ80SY5 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Prpf38bQ80SY5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Prpf38bQ80SY5 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf38bQ80SY5 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Prpf38bQ80SY5 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf38bQ80SY5 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Prpf38bQ80SY5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.26■□□□□ 0.83
Prpf38bQ80SY5 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.26■□□□□ 0.83
Prpf38bQ80SY5 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.26■□□□□ 0.83
Prpf38bQ80SY5 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.26■□□□□ 0.83
Prpf38bQ80SY5 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf38bQ80SY5 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf38bQ80SY5 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf38bQ80SY5 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf38bQ80SY5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf38bQ80SY5 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf38bQ80SY5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf38bQ80SY5 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Prpf38bQ80SY5 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms