Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.74■■□□□ 1.07
Dhx40Q6PE54 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Dhx40Q6PE54 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.74■■□□□ 1.07
Dhx40Q6PE54 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Dhx40Q6PE54 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Dhx40Q6PE54 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Dhx40Q6PE54 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Dhx40Q6PE54 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Dhx40Q6PE54 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Dhx40Q6PE54 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Dhx40Q6PE54 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Dhx40Q6PE54 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Dhx40Q6PE54 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Dhx40Q6PE54 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Dhx40Q6PE54 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.73■■□□□ 1.07
Dhx40Q6PE54 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Dhx40Q6PE54 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Dhx40Q6PE54 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Dhx40Q6PE54 Gm9959-201ENSMUST00000068277 390 ntBASIC21.73■■□□□ 1.07
Dhx40Q6PE54 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.73■■□□□ 1.07
Dhx40Q6PE54 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.73■■□□□ 1.07
Dhx40Q6PE54 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Dhx40Q6PE54 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Dhx40Q6PE54 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Dhx40Q6PE54 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
Dhx40Q6PE54 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Dhx40Q6PE54 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Dhx40Q6PE54 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Dhx40Q6PE54 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.72■■□□□ 1.07
Dhx40Q6PE54 Gm45102-201ENSMUST00000207427 857 ntBASIC21.72■■□□□ 1.07
Dhx40Q6PE54 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Dhx40Q6PE54 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Dhx40Q6PE54 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Dhx40Q6PE54 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Dhx40Q6PE54 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Dhx40Q6PE54 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.71■■□□□ 1.07
Dhx40Q6PE54 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.71■■□□□ 1.07
Dhx40Q6PE54 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Dhx40Q6PE54 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Dhx40Q6PE54 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Dhx40Q6PE54 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Dhx40Q6PE54 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Dhx40Q6PE54 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Dhx40Q6PE54 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Dhx40Q6PE54 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Dhx40Q6PE54 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Dhx40Q6PE54 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Dhx40Q6PE54 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Dhx40Q6PE54 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Dhx40Q6PE54 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Dhx40Q6PE54 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Dhx40Q6PE54 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Dhx40Q6PE54 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.69■■□□□ 1.06
Dhx40Q6PE54 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.69■■□□□ 1.06
Dhx40Q6PE54 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Dhx40Q6PE54 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Dhx40Q6PE54 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Dhx40Q6PE54 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Dhx40Q6PE54 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Dhx40Q6PE54 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Dhx40Q6PE54 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Dhx40Q6PE54 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Dhx40Q6PE54 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Dhx40Q6PE54 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.68■■□□□ 1.06
Dhx40Q6PE54 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.68■■□□□ 1.06
Dhx40Q6PE54 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
Dhx40Q6PE54 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Dhx40Q6PE54 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Dhx40Q6PE54 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Dhx40Q6PE54 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.68■■□□□ 1.06
Dhx40Q6PE54 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Dhx40Q6PE54 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.67■■□□□ 1.06
Dhx40Q6PE54 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Dhx40Q6PE54 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Dhx40Q6PE54 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Dhx40Q6PE54 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Dhx40Q6PE54 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Dhx40Q6PE54 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Dhx40Q6PE54 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Dhx40Q6PE54 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Dhx40Q6PE54 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Dhx40Q6PE54 AA386476-201ENSMUST00000098781 1665 ntBASIC21.66■■□□□ 1.06
Dhx40Q6PE54 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Dhx40Q6PE54 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Dhx40Q6PE54 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Dhx40Q6PE54 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.66■■□□□ 1.06
Dhx40Q6PE54 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Dhx40Q6PE54 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.66■■□□□ 1.06
Dhx40Q6PE54 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Dhx40Q6PE54 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Dhx40Q6PE54 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Dhx40Q6PE54 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Dhx40Q6PE54 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Dhx40Q6PE54 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Dhx40Q6PE54 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Dhx40Q6PE54 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Dhx40Q6PE54 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.65■■□□□ 1.06
Dhx40Q6PE54 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Dhx40Q6PE54 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Dhx40Q6PE54 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms