Protein–RNA interactions for Protein: Q6PE13

Prrt3, Proline-rich transmembrane protein 3, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt3Q6PE13 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.58■□□□□ 0.89
Prrt3Q6PE13 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Prrt3Q6PE13 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Prrt3Q6PE13 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Prrt3Q6PE13 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Prrt3Q6PE13 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.58■□□□□ 0.89
Prrt3Q6PE13 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Prrt3Q6PE13 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Prrt3Q6PE13 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Prrt3Q6PE13 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Prrt3Q6PE13 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.57■□□□□ 0.88
Prrt3Q6PE13 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.57■□□□□ 0.88
Prrt3Q6PE13 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prrt3Q6PE13 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prrt3Q6PE13 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.57■□□□□ 0.88
Prrt3Q6PE13 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.57■□□□□ 0.88
Prrt3Q6PE13 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Prrt3Q6PE13 Gm27801-201ENSMUST00000184174 223 ntBASIC20.57■□□□□ 0.88
Prrt3Q6PE13 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prrt3Q6PE13 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prrt3Q6PE13 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prrt3Q6PE13 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Prrt3Q6PE13 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Prrt3Q6PE13 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Prrt3Q6PE13 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prrt3Q6PE13 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prrt3Q6PE13 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.56■□□□□ 0.88
Prrt3Q6PE13 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prrt3Q6PE13 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prrt3Q6PE13 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prrt3Q6PE13 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.56■□□□□ 0.88
Prrt3Q6PE13 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Prrt3Q6PE13 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prrt3Q6PE13 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prrt3Q6PE13 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prrt3Q6PE13 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.55■□□□□ 0.88
Prrt3Q6PE13 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prrt3Q6PE13 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Prrt3Q6PE13 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prrt3Q6PE13 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prrt3Q6PE13 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prrt3Q6PE13 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prrt3Q6PE13 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prrt3Q6PE13 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prrt3Q6PE13 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Prrt3Q6PE13 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.54■□□□□ 0.88
Prrt3Q6PE13 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.54■□□□□ 0.88
Prrt3Q6PE13 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prrt3Q6PE13 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prrt3Q6PE13 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prrt3Q6PE13 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prrt3Q6PE13 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prrt3Q6PE13 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prrt3Q6PE13 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prrt3Q6PE13 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prrt3Q6PE13 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Prrt3Q6PE13 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prrt3Q6PE13 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
Prrt3Q6PE13 Gm13234-201ENSMUST00000120010 747 ntBASIC20.53■□□□□ 0.88
Prrt3Q6PE13 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prrt3Q6PE13 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.53■□□□□ 0.88
Prrt3Q6PE13 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prrt3Q6PE13 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prrt3Q6PE13 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prrt3Q6PE13 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Prrt3Q6PE13 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Prrt3Q6PE13 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Prrt3Q6PE13 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prrt3Q6PE13 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.52■□□□□ 0.88
Prrt3Q6PE13 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.52■□□□□ 0.88
Prrt3Q6PE13 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prrt3Q6PE13 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prrt3Q6PE13 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.52■□□□□ 0.88
Prrt3Q6PE13 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prrt3Q6PE13 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.52■□□□□ 0.88
Prrt3Q6PE13 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Prrt3Q6PE13 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prrt3Q6PE13 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Prrt3Q6PE13 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prrt3Q6PE13 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.51■□□□□ 0.87
Prrt3Q6PE13 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC20.51■□□□□ 0.87
Prrt3Q6PE13 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Prrt3Q6PE13 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prrt3Q6PE13 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Prrt3Q6PE13 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prrt3Q6PE13 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prrt3Q6PE13 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prrt3Q6PE13 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Prrt3Q6PE13 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prrt3Q6PE13 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prrt3Q6PE13 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.5■□□□□ 0.87
Prrt3Q6PE13 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prrt3Q6PE13 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prrt3Q6PE13 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Prrt3Q6PE13 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Prrt3Q6PE13 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Prrt3Q6PE13 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Prrt3Q6PE13 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Prrt3Q6PE13 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.49■□□□□ 0.87
Prrt3Q6PE13 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms