Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ShbQ6PD21 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ShbQ6PD21 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
ShbQ6PD21 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ShbQ6PD21 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.52■■□□□ 1.04
ShbQ6PD21 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.52■■□□□ 1.03
ShbQ6PD21 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
ShbQ6PD21 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
ShbQ6PD21 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ShbQ6PD21 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.51■■□□□ 1.03
ShbQ6PD21 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ShbQ6PD21 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ShbQ6PD21 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.5■■□□□ 1.03
ShbQ6PD21 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.5■■□□□ 1.03
ShbQ6PD21 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.5■■□□□ 1.03
ShbQ6PD21 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ShbQ6PD21 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ShbQ6PD21 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ShbQ6PD21 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.49■■□□□ 1.03
ShbQ6PD21 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ShbQ6PD21 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
ShbQ6PD21 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
ShbQ6PD21 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.49■■□□□ 1.03
ShbQ6PD21 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ShbQ6PD21 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ShbQ6PD21 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ShbQ6PD21 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ShbQ6PD21 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ShbQ6PD21 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
ShbQ6PD21 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.48■■□□□ 1.03
ShbQ6PD21 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
ShbQ6PD21 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ShbQ6PD21 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.48■■□□□ 1.03
ShbQ6PD21 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ShbQ6PD21 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.48■■□□□ 1.03
ShbQ6PD21 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ShbQ6PD21 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
ShbQ6PD21 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ShbQ6PD21 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.48■■□□□ 1.03
ShbQ6PD21 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ShbQ6PD21 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ShbQ6PD21 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ShbQ6PD21 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ShbQ6PD21 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
ShbQ6PD21 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
ShbQ6PD21 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
ShbQ6PD21 Gm15565-201ENSMUST00000118890 427 ntBASIC21.47■■□□□ 1.03
ShbQ6PD21 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
ShbQ6PD21 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
ShbQ6PD21 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
ShbQ6PD21 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ShbQ6PD21 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
ShbQ6PD21 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
ShbQ6PD21 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ShbQ6PD21 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ShbQ6PD21 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ShbQ6PD21 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ShbQ6PD21 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ShbQ6PD21 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
ShbQ6PD21 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.46■■□□□ 1.03
ShbQ6PD21 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ShbQ6PD21 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ShbQ6PD21 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.46■■□□□ 1.03
ShbQ6PD21 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.46■■□□□ 1.03
ShbQ6PD21 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
ShbQ6PD21 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ShbQ6PD21 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ShbQ6PD21 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
ShbQ6PD21 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
ShbQ6PD21 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.45■■□□□ 1.02
ShbQ6PD21 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ShbQ6PD21 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ShbQ6PD21 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.45■■□□□ 1.02
ShbQ6PD21 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ShbQ6PD21 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
ShbQ6PD21 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ShbQ6PD21 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ShbQ6PD21 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
ShbQ6PD21 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.44■■□□□ 1.02
ShbQ6PD21 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21.44■■□□□ 1.02
ShbQ6PD21 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ShbQ6PD21 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ShbQ6PD21 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ShbQ6PD21 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ShbQ6PD21 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
ShbQ6PD21 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ShbQ6PD21 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ShbQ6PD21 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
ShbQ6PD21 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ShbQ6PD21 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
ShbQ6PD21 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ShbQ6PD21 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ShbQ6PD21 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ShbQ6PD21 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
ShbQ6PD21 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ShbQ6PD21 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.41■■□□□ 1.02
ShbQ6PD21 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ShbQ6PD21 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
ShbQ6PD21 Gm11643-201ENSMUST00000119578 864 ntBASIC21.41■■□□□ 1.02
ShbQ6PD21 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms