Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcd3Q6P9Z1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcd3Q6P9Z1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Smarcd3Q6P9Z1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcd3Q6P9Z1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcd3Q6P9Z1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcd3Q6P9Z1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Smarcd3Q6P9Z1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.87■□□□□ 0.45
Smarcd3Q6P9Z1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcd3Q6P9Z1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Smarcd3Q6P9Z1 Gm15546-201ENSMUST00000122095 826 ntBASIC17.87■□□□□ 0.45
Smarcd3Q6P9Z1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcd3Q6P9Z1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcd3Q6P9Z1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.87■□□□□ 0.45
Smarcd3Q6P9Z1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcd3Q6P9Z1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Smarcd3Q6P9Z1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Smarcd3Q6P9Z1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.86■□□□□ 0.45
Smarcd3Q6P9Z1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcd3Q6P9Z1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcd3Q6P9Z1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcd3Q6P9Z1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcd3Q6P9Z1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcd3Q6P9Z1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.86■□□□□ 0.45
Smarcd3Q6P9Z1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcd3Q6P9Z1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Smarcd3Q6P9Z1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Smarcd3Q6P9Z1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Smarcd3Q6P9Z1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcd3Q6P9Z1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.86■□□□□ 0.45
Smarcd3Q6P9Z1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcd3Q6P9Z1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcd3Q6P9Z1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcd3Q6P9Z1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcd3Q6P9Z1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.85■□□□□ 0.45
Smarcd3Q6P9Z1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.85■□□□□ 0.45
Smarcd3Q6P9Z1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcd3Q6P9Z1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.85■□□□□ 0.45
Smarcd3Q6P9Z1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.85■□□□□ 0.45
Smarcd3Q6P9Z1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.85■□□□□ 0.45
Smarcd3Q6P9Z1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.85■□□□□ 0.45
Smarcd3Q6P9Z1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcd3Q6P9Z1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcd3Q6P9Z1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcd3Q6P9Z1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcd3Q6P9Z1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcd3Q6P9Z1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcd3Q6P9Z1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Smarcd3Q6P9Z1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Smarcd3Q6P9Z1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Smarcd3Q6P9Z1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcd3Q6P9Z1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Smarcd3Q6P9Z1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Smarcd3Q6P9Z1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcd3Q6P9Z1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Smarcd3Q6P9Z1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcd3Q6P9Z1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcd3Q6P9Z1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcd3Q6P9Z1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcd3Q6P9Z1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.84■□□□□ 0.45
Smarcd3Q6P9Z1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smarcd3Q6P9Z1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Smarcd3Q6P9Z1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smarcd3Q6P9Z1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smarcd3Q6P9Z1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcd3Q6P9Z1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcd3Q6P9Z1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcd3Q6P9Z1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Smarcd3Q6P9Z1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Smarcd3Q6P9Z1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcd3Q6P9Z1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Smarcd3Q6P9Z1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcd3Q6P9Z1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcd3Q6P9Z1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcd3Q6P9Z1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcd3Q6P9Z1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcd3Q6P9Z1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Smarcd3Q6P9Z1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcd3Q6P9Z1 Etf1-202ENSMUST00000180351 108 ntBASIC17.82■□□□□ 0.44
Smarcd3Q6P9Z1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcd3Q6P9Z1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcd3Q6P9Z1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcd3Q6P9Z1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcd3Q6P9Z1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Smarcd3Q6P9Z1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Smarcd3Q6P9Z1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcd3Q6P9Z1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.81■□□□□ 0.44
Smarcd3Q6P9Z1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.81■□□□□ 0.44
Smarcd3Q6P9Z1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcd3Q6P9Z1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Smarcd3Q6P9Z1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcd3Q6P9Z1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcd3Q6P9Z1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcd3Q6P9Z1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcd3Q6P9Z1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcd3Q6P9Z1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcd3Q6P9Z1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.81■□□□□ 0.44
Smarcd3Q6P9Z1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcd3Q6P9Z1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcd3Q6P9Z1 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms