Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Zic4Q61467 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Zic4Q61467 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Zic4Q61467 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Zic4Q61467 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Zic4Q61467 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Zic4Q61467 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Zic4Q61467 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Zic4Q61467 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Zic4Q61467 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Zic4Q61467 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Zic4Q61467 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Zic4Q61467 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Zic4Q61467 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Zic4Q61467 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Zic4Q61467 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Zic4Q61467 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Zic4Q61467 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Zic4Q61467 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Zic4Q61467 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Zic4Q61467 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Zic4Q61467 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Zic4Q61467 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Zic4Q61467 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Zic4Q61467 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Zic4Q61467 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Zic4Q61467 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.86■□□□□ 0.13
Zic4Q61467 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Zic4Q61467 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Zic4Q61467 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Zic4Q61467 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Zic4Q61467 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Zic4Q61467 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Zic4Q61467 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Zic4Q61467 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Zic4Q61467 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Zic4Q61467 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Zic4Q61467 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Zic4Q61467 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Zic4Q61467 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Zic4Q61467 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.85■□□□□ 0.13
Zic4Q61467 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Zic4Q61467 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Zic4Q61467 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Zic4Q61467 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Zic4Q61467 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Zic4Q61467 Mir6236-201ENSMUST00000184437 123 ntBASIC15.85■□□□□ 0.13
Zic4Q61467 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Zic4Q61467 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Zic4Q61467 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.85■□□□□ 0.13
Zic4Q61467 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Zic4Q61467 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Zic4Q61467 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Zic4Q61467 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Zic4Q61467 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Zic4Q61467 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Zic4Q61467 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.85■□□□□ 0.13
Zic4Q61467 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Zic4Q61467 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Zic4Q61467 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Zic4Q61467 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.84■□□□□ 0.13
Zic4Q61467 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Zic4Q61467 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Zic4Q61467 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Zic4Q61467 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Zic4Q61467 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Zic4Q61467 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Zic4Q61467 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Zic4Q61467 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Zic4Q61467 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Zic4Q61467 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Zic4Q61467 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Zic4Q61467 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Zic4Q61467 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Zic4Q61467 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.84■□□□□ 0.13
Zic4Q61467 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Zic4Q61467 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Zic4Q61467 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Zic4Q61467 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Zic4Q61467 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Zic4Q61467 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Zic4Q61467 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Zic4Q61467 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Zic4Q61467 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Zic4Q61467 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Zic4Q61467 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Zic4Q61467 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Zic4Q61467 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Zic4Q61467 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zic4Q61467 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zic4Q61467 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.82■□□□□ 0.12
Zic4Q61467 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Zic4Q61467 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zic4Q61467 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zic4Q61467 Gm11175-201ENSMUST00000116172 543 ntBASIC15.82■□□□□ 0.12
Zic4Q61467 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC15.82■□□□□ 0.12
Zic4Q61467 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Zic4Q61467 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zic4Q61467 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zic4Q61467 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms