Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Snhg20-203ENSMUST00000182811 2153 ntBASIC25.66■■□□□ 1.7
Ccne1Q61457 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ccne1Q61457 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ccne1Q61457 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ccne1Q61457 Mir5133-201ENSMUST00000174955 77 ntBASIC25.65■■□□□ 1.7
Ccne1Q61457 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ccne1Q61457 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ccne1Q61457 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ccne1Q61457 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ccne1Q61457 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ccne1Q61457 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Ccne1Q61457 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Ccne1Q61457 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Ccne1Q61457 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ccne1Q61457 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Ccne1Q61457 AA386476-201ENSMUST00000098781 1665 ntBASIC25.63■■□□□ 1.69
Ccne1Q61457 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ccne1Q61457 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Ccne1Q61457 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC25.63■■□□□ 1.69
Ccne1Q61457 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC25.63■■□□□ 1.69
Ccne1Q61457 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ccne1Q61457 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
Ccne1Q61457 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC25.62■■□□□ 1.69
Ccne1Q61457 AC154266.1-201ENSMUST00000223190 503 ntBASIC25.62■■□□□ 1.69
Ccne1Q61457 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Ccne1Q61457 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ccne1Q61457 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC25.61■■□□□ 1.69
Ccne1Q61457 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Ccne1Q61457 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ccne1Q61457 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC25.6■■□□□ 1.69
Ccne1Q61457 Gm12441-201ENSMUST00000121806 588 ntBASIC25.6■■□□□ 1.69
Ccne1Q61457 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Ccne1Q61457 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Ccne1Q61457 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Ccne1Q61457 Gm43909-201ENSMUST00000203443 1876 ntBASIC25.6■■□□□ 1.69
Ccne1Q61457 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ccne1Q61457 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC25.59■■□□□ 1.69
Ccne1Q61457 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Ccne1Q61457 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Ccne1Q61457 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ccne1Q61457 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Ccne1Q61457 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ccne1Q61457 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC25.58■■□□□ 1.69
Ccne1Q61457 Gm15043-201ENSMUST00000118843 1543 ntBASIC25.58■■□□□ 1.69
Ccne1Q61457 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
Ccne1Q61457 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ccne1Q61457 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ccne1Q61457 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ccne1Q61457 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ccne1Q61457 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Ccne1Q61457 Gm13042-201ENSMUST00000119244 1955 ntBASIC25.57■■□□□ 1.68
Ccne1Q61457 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ccne1Q61457 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ccne1Q61457 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ccne1Q61457 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ccne1Q61457 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC25.57■■□□□ 1.68
Ccne1Q61457 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Ccne1Q61457 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ccne1Q61457 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC25.57■■□□□ 1.68
Ccne1Q61457 Gm4968-201ENSMUST00000071458 858 ntBASIC25.57■■□□□ 1.68
Ccne1Q61457 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ccne1Q61457 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ccne1Q61457 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Ccne1Q61457 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC25.57■■□□□ 1.68
Ccne1Q61457 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ccne1Q61457 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ccne1Q61457 Gm13148-201ENSMUST00000118892 745 ntBASIC25.56■■□□□ 1.68
Ccne1Q61457 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Ccne1Q61457 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC25.56■■□□□ 1.68
Ccne1Q61457 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ccne1Q61457 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Ccne1Q61457 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ccne1Q61457 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ccne1Q61457 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Ccne1Q61457 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC25.55■■□□□ 1.68
Ccne1Q61457 Gm6420-201ENSMUST00000193885 723 ntBASIC25.55■■□□□ 1.68
Ccne1Q61457 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ccne1Q61457 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ccne1Q61457 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ccne1Q61457 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC25.55■■□□□ 1.68
Ccne1Q61457 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ccne1Q61457 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ccne1Q61457 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
Ccne1Q61457 Gm10653-202ENSMUST00000139570 835 ntBASIC25.54■■□□□ 1.68
Ccne1Q61457 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ccne1Q61457 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC25.54■■□□□ 1.68
Ccne1Q61457 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ccne1Q61457 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
Ccne1Q61457 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC25.53■■□□□ 1.68
Ccne1Q61457 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ccne1Q61457 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC25.53■■□□□ 1.68
Ccne1Q61457 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ccne1Q61457 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ccne1Q61457 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ccne1Q61457 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
Ccne1Q61457 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC25.52■■□□□ 1.68
Ccne1Q61457 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Ccne1Q61457 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC25.52■■□□□ 1.68
Ccne1Q61457 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ccne1Q61457 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC25.52■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms