Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Foxf1Q61080 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Foxf1Q61080 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Foxf1Q61080 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.34■□□□□ 0.21
Foxf1Q61080 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Foxf1Q61080 Gm21956-201ENSMUST00000179946 522 ntBASIC16.34■□□□□ 0.21
Foxf1Q61080 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.34■□□□□ 0.21
Foxf1Q61080 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.34■□□□□ 0.21
Foxf1Q61080 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Foxf1Q61080 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Foxf1Q61080 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Foxf1Q61080 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Foxf1Q61080 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Foxf1Q61080 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Foxf1Q61080 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Foxf1Q61080 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Foxf1Q61080 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Foxf1Q61080 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Foxf1Q61080 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Foxf1Q61080 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Foxf1Q61080 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Foxf1Q61080 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxf1Q61080 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Foxf1Q61080 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.33■□□□□ 0.2
Foxf1Q61080 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.33■□□□□ 0.2
Foxf1Q61080 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Foxf1Q61080 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxf1Q61080 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.33■□□□□ 0.2
Foxf1Q61080 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxf1Q61080 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxf1Q61080 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.33■□□□□ 0.2
Foxf1Q61080 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxf1Q61080 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxf1Q61080 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxf1Q61080 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxf1Q61080 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.32■□□□□ 0.2
Foxf1Q61080 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.32■□□□□ 0.2
Foxf1Q61080 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxf1Q61080 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxf1Q61080 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxf1Q61080 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxf1Q61080 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Foxf1Q61080 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxf1Q61080 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxf1Q61080 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxf1Q61080 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxf1Q61080 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxf1Q61080 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxf1Q61080 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxf1Q61080 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.31■□□□□ 0.2
Foxf1Q61080 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Foxf1Q61080 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Foxf1Q61080 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxf1Q61080 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Foxf1Q61080 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxf1Q61080 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxf1Q61080 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Foxf1Q61080 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxf1Q61080 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.3■□□□□ 0.2
Foxf1Q61080 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Foxf1Q61080 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.3■□□□□ 0.2
Foxf1Q61080 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxf1Q61080 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxf1Q61080 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxf1Q61080 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxf1Q61080 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Foxf1Q61080 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxf1Q61080 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxf1Q61080 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Foxf1Q61080 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxf1Q61080 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.29■□□□□ 0.2
Foxf1Q61080 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxf1Q61080 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxf1Q61080 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxf1Q61080 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Foxf1Q61080 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.29■□□□□ 0.2
Foxf1Q61080 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.29■□□□□ 0.2
Foxf1Q61080 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
Foxf1Q61080 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Foxf1Q61080 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Foxf1Q61080 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxf1Q61080 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
Foxf1Q61080 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Foxf1Q61080 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxf1Q61080 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxf1Q61080 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Foxf1Q61080 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxf1Q61080 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.28■□□□□ 0.2
Foxf1Q61080 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.28■□□□□ 0.2
Foxf1Q61080 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxf1Q61080 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.28■□□□□ 0.2
Foxf1Q61080 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxf1Q61080 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Foxf1Q61080 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Foxf1Q61080 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Foxf1Q61080 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.27■□□□□ 0.2
Foxf1Q61080 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Foxf1Q61080 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Foxf1Q61080 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Foxf1Q61080 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms