Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Nr1h4Q60641 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1h4Q60641 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1h4Q60641 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1h4Q60641 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1h4Q60641 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1h4Q60641 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1h4Q60641 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1h4Q60641 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1h4Q60641 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1h4Q60641 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1h4Q60641 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1h4Q60641 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1h4Q60641 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Nr1h4Q60641 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1h4Q60641 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.59■□□□□ 0.57
Nr1h4Q60641 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1h4Q60641 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.59■□□□□ 0.57
Nr1h4Q60641 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1h4Q60641 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1h4Q60641 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1h4Q60641 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.59■□□□□ 0.57
Nr1h4Q60641 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Nr1h4Q60641 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.59■□□□□ 0.57
Nr1h4Q60641 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1h4Q60641 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Nr1h4Q60641 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nr1h4Q60641 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Nr1h4Q60641 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Nr1h4Q60641 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nr1h4Q60641 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nr1h4Q60641 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Nr1h4Q60641 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.58■□□□□ 0.56
Nr1h4Q60641 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nr1h4Q60641 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nr1h4Q60641 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Nr1h4Q60641 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nr1h4Q60641 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1h4Q60641 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1h4Q60641 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1h4Q60641 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1h4Q60641 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1h4Q60641 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1h4Q60641 Gm43530-201ENSMUST00000195920 274 ntBASIC18.57■□□□□ 0.56
Nr1h4Q60641 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1h4Q60641 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.57■□□□□ 0.56
Nr1h4Q60641 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1h4Q60641 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Nr1h4Q60641 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1h4Q60641 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1h4Q60641 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1h4Q60641 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nr1h4Q60641 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.56■□□□□ 0.56
Nr1h4Q60641 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.56■□□□□ 0.56
Nr1h4Q60641 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nr1h4Q60641 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nr1h4Q60641 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nr1h4Q60641 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Nr1h4Q60641 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.56■□□□□ 0.56
Nr1h4Q60641 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nr1h4Q60641 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nr1h4Q60641 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nr1h4Q60641 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nr1h4Q60641 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nr1h4Q60641 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nr1h4Q60641 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nr1h4Q60641 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nr1h4Q60641 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Nr1h4Q60641 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nr1h4Q60641 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Nr1h4Q60641 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nr1h4Q60641 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Nr1h4Q60641 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nr1h4Q60641 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Nr1h4Q60641 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.54■□□□□ 0.56
Nr1h4Q60641 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nr1h4Q60641 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nr1h4Q60641 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nr1h4Q60641 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nr1h4Q60641 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nr1h4Q60641 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nr1h4Q60641 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nr1h4Q60641 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nr1h4Q60641 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nr1h4Q60641 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nr1h4Q60641 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Nr1h4Q60641 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Nr1h4Q60641 Gm9870-201ENSMUST00000063874 645 ntBASIC18.53■□□□□ 0.56
Nr1h4Q60641 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nr1h4Q60641 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Nr1h4Q60641 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nr1h4Q60641 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Nr1h4Q60641 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nr1h4Q60641 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nr1h4Q60641 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nr1h4Q60641 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nr1h4Q60641 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nr1h4Q60641 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nr1h4Q60641 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nr1h4Q60641 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms