Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7d-3Q5R1I1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Trav7d-3Q5R1I1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav7d-3Q5R1I1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav7d-3Q5R1I1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav7d-3Q5R1I1 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.33□□□□□ -0.12
Trav7d-3Q5R1I1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7d-3Q5R1I1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7d-3Q5R1I1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7d-3Q5R1I1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7d-3Q5R1I1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7d-3Q5R1I1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7d-3Q5R1I1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7d-3Q5R1I1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav7d-3Q5R1I1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7d-3Q5R1I1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7d-3Q5R1I1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7d-3Q5R1I1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7d-3Q5R1I1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7d-3Q5R1I1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav7d-3Q5R1I1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav7d-3Q5R1I1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7d-3Q5R1I1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7d-3Q5R1I1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7d-3Q5R1I1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav7d-3Q5R1I1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7d-3Q5R1I1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Trav7d-3Q5R1I1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7d-3Q5R1I1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7d-3Q5R1I1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7d-3Q5R1I1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7d-3Q5R1I1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7d-3Q5R1I1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
Trav7d-3Q5R1I1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav7d-3Q5R1I1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7d-3Q5R1I1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7d-3Q5R1I1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav7d-3Q5R1I1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7d-3Q5R1I1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7d-3Q5R1I1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7d-3Q5R1I1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7d-3Q5R1I1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7d-3Q5R1I1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Trav7d-3Q5R1I1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7d-3Q5R1I1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7d-3Q5R1I1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7d-3Q5R1I1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7d-3Q5R1I1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7d-3Q5R1I1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav7d-3Q5R1I1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trav7d-3Q5R1I1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7d-3Q5R1I1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7d-3Q5R1I1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7d-3Q5R1I1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7d-3Q5R1I1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7d-3Q5R1I1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7d-3Q5R1I1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Trav7d-3Q5R1I1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7d-3Q5R1I1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav7d-3Q5R1I1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7d-3Q5R1I1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7d-3Q5R1I1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7d-3Q5R1I1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7d-3Q5R1I1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7d-3Q5R1I1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7d-3Q5R1I1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7d-3Q5R1I1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav7d-3Q5R1I1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav7d-3Q5R1I1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7d-3Q5R1I1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7d-3Q5R1I1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav7d-3Q5R1I1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav7d-3Q5R1I1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.28□□□□□ -0.12
Trav7d-3Q5R1I1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Trav7d-3Q5R1I1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7d-3Q5R1I1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav7d-3Q5R1I1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7d-3Q5R1I1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7d-3Q5R1I1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav7d-3Q5R1I1 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.27□□□□□ -0.12
Trav7d-3Q5R1I1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav7d-3Q5R1I1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Trav7d-3Q5R1I1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav7d-3Q5R1I1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav7d-3Q5R1I1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav7d-3Q5R1I1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav7d-3Q5R1I1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.27□□□□□ -0.13
Trav7d-3Q5R1I1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7d-3Q5R1I1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7d-3Q5R1I1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Trav7d-3Q5R1I1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav7d-3Q5R1I1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7d-3Q5R1I1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trav7d-3Q5R1I1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7d-3Q5R1I1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7d-3Q5R1I1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7d-3Q5R1I1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav7d-3Q5R1I1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7d-3Q5R1I1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Trav7d-3Q5R1I1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms