Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav7d-4Q5R1H9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav7d-4Q5R1H9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav7d-4Q5R1H9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav7d-4Q5R1H9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav7d-4Q5R1H9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav7d-4Q5R1H9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav7d-4Q5R1H9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav7d-4Q5R1H9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav7d-4Q5R1H9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav7d-4Q5R1H9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav7d-4Q5R1H9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav7d-4Q5R1H9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav7d-4Q5R1H9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav7d-4Q5R1H9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav7d-4Q5R1H9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav7d-4Q5R1H9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7d-4Q5R1H9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav7d-4Q5R1H9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7d-4Q5R1H9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7d-4Q5R1H9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trav7d-4Q5R1H9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav7d-4Q5R1H9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7d-4Q5R1H9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC14.89□□□□□ -0.03
Trav7d-4Q5R1H9 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7d-4Q5R1H9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Trav7d-4Q5R1H9 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.89□□□□□ -0.03
Trav7d-4Q5R1H9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7d-4Q5R1H9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7d-4Q5R1H9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7d-4Q5R1H9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trav7d-4Q5R1H9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7d-4Q5R1H9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7d-4Q5R1H9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7d-4Q5R1H9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7d-4Q5R1H9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7d-4Q5R1H9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7d-4Q5R1H9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7d-4Q5R1H9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7d-4Q5R1H9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7d-4Q5R1H9 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.88□□□□□ -0.03
Trav7d-4Q5R1H9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7d-4Q5R1H9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7d-4Q5R1H9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7d-4Q5R1H9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7d-4Q5R1H9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav7d-4Q5R1H9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7d-4Q5R1H9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7d-4Q5R1H9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7d-4Q5R1H9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trav7d-4Q5R1H9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav7d-4Q5R1H9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav7d-4Q5R1H9 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.88□□□□□ -0.03
Trav7d-4Q5R1H9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7d-4Q5R1H9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7d-4Q5R1H9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7d-4Q5R1H9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Trav7d-4Q5R1H9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7d-4Q5R1H9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7d-4Q5R1H9 Grk6-206ENSMUST00000224995 2971 ntBASIC14.87□□□□□ -0.03
Trav7d-4Q5R1H9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.87□□□□□ -0.03
Trav7d-4Q5R1H9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7d-4Q5R1H9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trav7d-4Q5R1H9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7d-4Q5R1H9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7d-4Q5R1H9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC14.87□□□□□ -0.03
Trav7d-4Q5R1H9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav7d-4Q5R1H9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7d-4Q5R1H9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7d-4Q5R1H9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7d-4Q5R1H9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7d-4Q5R1H9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7d-4Q5R1H9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7d-4Q5R1H9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.87□□□□□ -0.03
Trav7d-4Q5R1H9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav7d-4Q5R1H9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav7d-4Q5R1H9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav7d-4Q5R1H9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav7d-4Q5R1H9 Gm11847-201ENSMUST00000125165 1119 ntBASIC14.86□□□□□ -0.03
Trav7d-4Q5R1H9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trav7d-4Q5R1H9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Trav7d-4Q5R1H9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav7d-4Q5R1H9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav7d-4Q5R1H9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav7d-4Q5R1H9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav7d-4Q5R1H9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav7d-4Q5R1H9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav7d-4Q5R1H9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7d-4Q5R1H9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7d-4Q5R1H9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav7d-4Q5R1H9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7d-4Q5R1H9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7d-4Q5R1H9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7d-4Q5R1H9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7d-4Q5R1H9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7d-4Q5R1H9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7d-4Q5R1H9 Gm6311-201ENSMUST00000073790 878 ntBASIC14.85□□□□□ -0.03
Trav7d-4Q5R1H9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7d-4Q5R1H9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7d-4Q5R1H9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms