Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Gm11175-201ENSMUST00000116172 543 ntBASIC15.17■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Golph3-205ENSMUST00000228671 2842 ntBASIC15.16■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Mir6236-201ENSMUST00000184437 123 ntBASIC15.16■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Gm5067-201ENSMUST00000170449 1009 ntBASIC15.15■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.15■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.15■□□□□ 0.02
Trav15-1-dv6-1Q5R1D2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Gm45444-201ENSMUST00000211394 898 ntBASIC15.14■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Nsd1-203ENSMUST00000224156 1149 ntBASIC15.14■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.11■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.11■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms