Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Bdp1Q571C7 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Bdp1Q571C7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Bdp1Q571C7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Bdp1Q571C7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Bdp1Q571C7 Gm10517-202ENSMUST00000192970 758 ntBASIC20.17■□□□□ 0.82
Bdp1Q571C7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Bdp1Q571C7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Bdp1Q571C7 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Bdp1Q571C7 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Bdp1Q571C7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Bdp1Q571C7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.17■□□□□ 0.82
Bdp1Q571C7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.17■□□□□ 0.82
Bdp1Q571C7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Bdp1Q571C7 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Bdp1Q571C7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Bdp1Q571C7 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Bdp1Q571C7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Bdp1Q571C7 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Bdp1Q571C7 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Bdp1Q571C7 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Bdp1Q571C7 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Bdp1Q571C7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Bdp1Q571C7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Bdp1Q571C7 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Bdp1Q571C7 Gm2559-201ENSMUST00000201323 363 ntBASIC20.16■□□□□ 0.82
Bdp1Q571C7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Bdp1Q571C7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Bdp1Q571C7 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Bdp1Q571C7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Bdp1Q571C7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Bdp1Q571C7 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.15■□□□□ 0.82
Bdp1Q571C7 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.15■□□□□ 0.82
Bdp1Q571C7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Bdp1Q571C7 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Bdp1Q571C7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
Bdp1Q571C7 Gm6659-201ENSMUST00000174752 547 ntBASIC20.14■□□□□ 0.82
Bdp1Q571C7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Bdp1Q571C7 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC20.14■□□□□ 0.81
Bdp1Q571C7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Bdp1Q571C7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Bdp1Q571C7 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Bdp1Q571C7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Bdp1Q571C7 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Bdp1Q571C7 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Bdp1Q571C7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Bdp1Q571C7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Bdp1Q571C7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Bdp1Q571C7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.13■□□□□ 0.81
Bdp1Q571C7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Bdp1Q571C7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Bdp1Q571C7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Bdp1Q571C7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.13■□□□□ 0.81
Bdp1Q571C7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.13■□□□□ 0.81
Bdp1Q571C7 Gm10698-201ENSMUST00000182663 604 ntBASIC20.13■□□□□ 0.81
Bdp1Q571C7 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Bdp1Q571C7 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Bdp1Q571C7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.13■□□□□ 0.81
Bdp1Q571C7 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Bdp1Q571C7 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.12■□□□□ 0.81
Bdp1Q571C7 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Bdp1Q571C7 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Bdp1Q571C7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Bdp1Q571C7 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Bdp1Q571C7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.12■□□□□ 0.81
Bdp1Q571C7 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Bdp1Q571C7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Bdp1Q571C7 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Bdp1Q571C7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Bdp1Q571C7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Bdp1Q571C7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.11■□□□□ 0.81
Bdp1Q571C7 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Bdp1Q571C7 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Bdp1Q571C7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Bdp1Q571C7 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.11■□□□□ 0.81
Bdp1Q571C7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Bdp1Q571C7 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.11■□□□□ 0.81
Bdp1Q571C7 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Bdp1Q571C7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
Bdp1Q571C7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Bdp1Q571C7 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Bdp1Q571C7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Bdp1Q571C7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Bdp1Q571C7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Bdp1Q571C7 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Bdp1Q571C7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Bdp1Q571C7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Bdp1Q571C7 Gm15378-201ENSMUST00000121894 207 ntBASIC20.1■□□□□ 0.81
Bdp1Q571C7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Bdp1Q571C7 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Bdp1Q571C7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Bdp1Q571C7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Bdp1Q571C7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.09■□□□□ 0.81
Bdp1Q571C7 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Bdp1Q571C7 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.09■□□□□ 0.81
Bdp1Q571C7 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Bdp1Q571C7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.09■□□□□ 0.81
Bdp1Q571C7 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Bdp1Q571C7 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Bdp1Q571C7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms