Protein–RNA interactions for Protein: Q3V3E1

Ubash3a, Ubiquitin-associated and SH3 domain-containing protein A, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubash3aQ3V3E1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Ubash3aQ3V3E1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ubash3aQ3V3E1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Ubash3aQ3V3E1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ubash3aQ3V3E1 AA386476-201ENSMUST00000098781 1665 ntBASIC22.46■■□□□ 1.19
Ubash3aQ3V3E1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Ubash3aQ3V3E1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Ubash3aQ3V3E1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ubash3aQ3V3E1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ubash3aQ3V3E1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Ubash3aQ3V3E1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC22.45■■□□□ 1.18
Ubash3aQ3V3E1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ubash3aQ3V3E1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC22.45■■□□□ 1.18
Ubash3aQ3V3E1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ubash3aQ3V3E1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Ubash3aQ3V3E1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Ubash3aQ3V3E1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC22.44■■□□□ 1.18
Ubash3aQ3V3E1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ubash3aQ3V3E1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ubash3aQ3V3E1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ubash3aQ3V3E1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ubash3aQ3V3E1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ubash3aQ3V3E1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ubash3aQ3V3E1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ubash3aQ3V3E1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ubash3aQ3V3E1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ubash3aQ3V3E1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC22.43■■□□□ 1.18
Ubash3aQ3V3E1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ubash3aQ3V3E1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ubash3aQ3V3E1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ubash3aQ3V3E1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC22.43■■□□□ 1.18
Ubash3aQ3V3E1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.43■■□□□ 1.18
Ubash3aQ3V3E1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ubash3aQ3V3E1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ubash3aQ3V3E1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC22.42■■□□□ 1.18
Ubash3aQ3V3E1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ubash3aQ3V3E1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ubash3aQ3V3E1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC22.42■■□□□ 1.18
Ubash3aQ3V3E1 Golgb1-201ENSMUST00000023534 498 ntBASIC22.42■■□□□ 1.18
Ubash3aQ3V3E1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ubash3aQ3V3E1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Ubash3aQ3V3E1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ubash3aQ3V3E1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ubash3aQ3V3E1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ubash3aQ3V3E1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ubash3aQ3V3E1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC22.41■■□□□ 1.18
Ubash3aQ3V3E1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC22.41■■□□□ 1.18
Ubash3aQ3V3E1 Gm43759-201ENSMUST00000196925 1261 ntBASIC22.41■■□□□ 1.18
Ubash3aQ3V3E1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ubash3aQ3V3E1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Ubash3aQ3V3E1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ubash3aQ3V3E1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ubash3aQ3V3E1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ubash3aQ3V3E1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC22.41■■□□□ 1.18
Ubash3aQ3V3E1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Ubash3aQ3V3E1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ubash3aQ3V3E1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ubash3aQ3V3E1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ubash3aQ3V3E1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ubash3aQ3V3E1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ubash3aQ3V3E1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ubash3aQ3V3E1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ubash3aQ3V3E1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ubash3aQ3V3E1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Ubash3aQ3V3E1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ubash3aQ3V3E1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ubash3aQ3V3E1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ubash3aQ3V3E1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ubash3aQ3V3E1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ubash3aQ3V3E1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Ubash3aQ3V3E1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ubash3aQ3V3E1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ubash3aQ3V3E1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC22.39■■□□□ 1.17
Ubash3aQ3V3E1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ubash3aQ3V3E1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ubash3aQ3V3E1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ubash3aQ3V3E1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ubash3aQ3V3E1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ubash3aQ3V3E1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.38■■□□□ 1.17
Ubash3aQ3V3E1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ubash3aQ3V3E1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC22.38■■□□□ 1.17
Ubash3aQ3V3E1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ubash3aQ3V3E1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ubash3aQ3V3E1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ubash3aQ3V3E1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ubash3aQ3V3E1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Ubash3aQ3V3E1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ubash3aQ3V3E1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ubash3aQ3V3E1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ubash3aQ3V3E1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC22.37■■□□□ 1.17
Ubash3aQ3V3E1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ubash3aQ3V3E1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ubash3aQ3V3E1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Ubash3aQ3V3E1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ubash3aQ3V3E1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ubash3aQ3V3E1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ubash3aQ3V3E1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
Ubash3aQ3V3E1 Golph3-205ENSMUST00000228671 2842 ntBASIC22.36■■□□□ 1.17
Ubash3aQ3V3E1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ubash3aQ3V3E1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 180.6 ms