Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cnga4Q3UW12 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Cnga4Q3UW12 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cnga4Q3UW12 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cnga4Q3UW12 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cnga4Q3UW12 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.8■□□□□ 0.76
Cnga4Q3UW12 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Cnga4Q3UW12 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cnga4Q3UW12 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cnga4Q3UW12 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.79■□□□□ 0.76
Cnga4Q3UW12 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cnga4Q3UW12 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.79■□□□□ 0.76
Cnga4Q3UW12 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cnga4Q3UW12 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Cnga4Q3UW12 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cnga4Q3UW12 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.79■□□□□ 0.76
Cnga4Q3UW12 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cnga4Q3UW12 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Cnga4Q3UW12 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cnga4Q3UW12 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.79■□□□□ 0.76
Cnga4Q3UW12 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cnga4Q3UW12 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.79■□□□□ 0.76
Cnga4Q3UW12 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.79■□□□□ 0.76
Cnga4Q3UW12 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cnga4Q3UW12 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Cnga4Q3UW12 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.79■□□□□ 0.76
Cnga4Q3UW12 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cnga4Q3UW12 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Cnga4Q3UW12 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cnga4Q3UW12 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Cnga4Q3UW12 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cnga4Q3UW12 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cnga4Q3UW12 Mir6236-201ENSMUST00000184437 123 ntBASIC19.78■□□□□ 0.76
Cnga4Q3UW12 Gm45444-201ENSMUST00000211394 898 ntBASIC19.78■□□□□ 0.76
Cnga4Q3UW12 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cnga4Q3UW12 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cnga4Q3UW12 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cnga4Q3UW12 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Cnga4Q3UW12 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.77■□□□□ 0.76
Cnga4Q3UW12 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cnga4Q3UW12 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cnga4Q3UW12 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cnga4Q3UW12 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cnga4Q3UW12 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cnga4Q3UW12 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Cnga4Q3UW12 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cnga4Q3UW12 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cnga4Q3UW12 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cnga4Q3UW12 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cnga4Q3UW12 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cnga4Q3UW12 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cnga4Q3UW12 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Cnga4Q3UW12 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cnga4Q3UW12 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cnga4Q3UW12 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cnga4Q3UW12 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cnga4Q3UW12 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cnga4Q3UW12 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.76■□□□□ 0.75
Cnga4Q3UW12 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cnga4Q3UW12 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cnga4Q3UW12 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cnga4Q3UW12 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cnga4Q3UW12 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cnga4Q3UW12 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cnga4Q3UW12 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.75■□□□□ 0.75
Cnga4Q3UW12 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cnga4Q3UW12 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cnga4Q3UW12 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cnga4Q3UW12 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cnga4Q3UW12 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cnga4Q3UW12 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cnga4Q3UW12 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cnga4Q3UW12 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cnga4Q3UW12 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cnga4Q3UW12 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cnga4Q3UW12 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cnga4Q3UW12 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.74■□□□□ 0.75
Cnga4Q3UW12 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Cnga4Q3UW12 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cnga4Q3UW12 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cnga4Q3UW12 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cnga4Q3UW12 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cnga4Q3UW12 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cnga4Q3UW12 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cnga4Q3UW12 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cnga4Q3UW12 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Cnga4Q3UW12 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cnga4Q3UW12 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Cnga4Q3UW12 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cnga4Q3UW12 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cnga4Q3UW12 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cnga4Q3UW12 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cnga4Q3UW12 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cnga4Q3UW12 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cnga4Q3UW12 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cnga4Q3UW12 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cnga4Q3UW12 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Cnga4Q3UW12 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cnga4Q3UW12 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cnga4Q3UW12 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms