Protein–RNA interactions for Protein: Q3UNW5

Tfcp2l1, Transcription factor CP2-like protein 1, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tfcp2l1Q3UNW5 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Tfcp2l1Q3UNW5 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC22.71■■□□□ 1.23
Tfcp2l1Q3UNW5 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Tfcp2l1Q3UNW5 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Tfcp2l1Q3UNW5 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Tfcp2l1Q3UNW5 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Tfcp2l1Q3UNW5 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Tfcp2l1Q3UNW5 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Tfcp2l1Q3UNW5 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC22.7■■□□□ 1.22
Tfcp2l1Q3UNW5 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Tfcp2l1Q3UNW5 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC22.7■■□□□ 1.22
Tfcp2l1Q3UNW5 Gm20049-201ENSMUST00000219950 730 ntBASIC22.7■■□□□ 1.22
Tfcp2l1Q3UNW5 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Tfcp2l1Q3UNW5 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
Tfcp2l1Q3UNW5 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC22.7■■□□□ 1.22
Tfcp2l1Q3UNW5 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Tfcp2l1Q3UNW5 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Tfcp2l1Q3UNW5 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Tfcp2l1Q3UNW5 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Tfcp2l1Q3UNW5 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Tfcp2l1Q3UNW5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Tfcp2l1Q3UNW5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Tfcp2l1Q3UNW5 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Tfcp2l1Q3UNW5 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Tfcp2l1Q3UNW5 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Tfcp2l1Q3UNW5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Tfcp2l1Q3UNW5 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Tfcp2l1Q3UNW5 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Tfcp2l1Q3UNW5 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.68■■□□□ 1.22
Tfcp2l1Q3UNW5 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Tfcp2l1Q3UNW5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Tfcp2l1Q3UNW5 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
Tfcp2l1Q3UNW5 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC22.68■■□□□ 1.22
Tfcp2l1Q3UNW5 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC22.68■■□□□ 1.22
Tfcp2l1Q3UNW5 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Tfcp2l1Q3UNW5 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
Tfcp2l1Q3UNW5 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Tfcp2l1Q3UNW5 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Tfcp2l1Q3UNW5 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Tfcp2l1Q3UNW5 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Tfcp2l1Q3UNW5 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Tfcp2l1Q3UNW5 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Tfcp2l1Q3UNW5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Tfcp2l1Q3UNW5 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Tfcp2l1Q3UNW5 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Tfcp2l1Q3UNW5 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Tfcp2l1Q3UNW5 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Tfcp2l1Q3UNW5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC22.66■■□□□ 1.22
Tfcp2l1Q3UNW5 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Tfcp2l1Q3UNW5 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Tfcp2l1Q3UNW5 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
Tfcp2l1Q3UNW5 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Tfcp2l1Q3UNW5 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Tfcp2l1Q3UNW5 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Tfcp2l1Q3UNW5 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Tfcp2l1Q3UNW5 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Tfcp2l1Q3UNW5 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Tfcp2l1Q3UNW5 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Tfcp2l1Q3UNW5 Gm13146-201ENSMUST00000118508 780 ntBASIC22.64■■□□□ 1.21
Tfcp2l1Q3UNW5 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Tfcp2l1Q3UNW5 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Tfcp2l1Q3UNW5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC22.64■■□□□ 1.21
Tfcp2l1Q3UNW5 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Tfcp2l1Q3UNW5 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC22.64■■□□□ 1.21
Tfcp2l1Q3UNW5 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Tfcp2l1Q3UNW5 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Tfcp2l1Q3UNW5 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Tfcp2l1Q3UNW5 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
Tfcp2l1Q3UNW5 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Tfcp2l1Q3UNW5 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Tfcp2l1Q3UNW5 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC22.62■■□□□ 1.21
Tfcp2l1Q3UNW5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Tfcp2l1Q3UNW5 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Tfcp2l1Q3UNW5 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Tfcp2l1Q3UNW5 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Tfcp2l1Q3UNW5 Mir6982-201ENSMUST00000184354 68 ntBASIC22.62■■□□□ 1.21
Tfcp2l1Q3UNW5 Gm6420-201ENSMUST00000193885 723 ntBASIC22.62■■□□□ 1.21
Tfcp2l1Q3UNW5 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Tfcp2l1Q3UNW5 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
Tfcp2l1Q3UNW5 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Tfcp2l1Q3UNW5 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Tfcp2l1Q3UNW5 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Tfcp2l1Q3UNW5 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Tfcp2l1Q3UNW5 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.61■■□□□ 1.21
Tfcp2l1Q3UNW5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Tfcp2l1Q3UNW5 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Tfcp2l1Q3UNW5 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Tfcp2l1Q3UNW5 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Tfcp2l1Q3UNW5 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
Tfcp2l1Q3UNW5 Gm37856-201ENSMUST00000191634 999 ntBASIC22.61■■□□□ 1.21
Tfcp2l1Q3UNW5 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Tfcp2l1Q3UNW5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Tfcp2l1Q3UNW5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Tfcp2l1Q3UNW5 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Tfcp2l1Q3UNW5 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Tfcp2l1Q3UNW5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Tfcp2l1Q3UNW5 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC22.6■■□□□ 1.21
Tfcp2l1Q3UNW5 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Tfcp2l1Q3UNW5 Gm12504-201ENSMUST00000120860 2231 ntBASIC22.6■■□□□ 1.21
Tfcp2l1Q3UNW5 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC22.6■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms