Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf149Q3U2C5 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf149Q3U2C5 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf149Q3U2C5 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf149Q3U2C5 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rnf149Q3U2C5 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf149Q3U2C5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Rnf149Q3U2C5 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf149Q3U2C5 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf149Q3U2C5 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf149Q3U2C5 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf149Q3U2C5 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf149Q3U2C5 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf149Q3U2C5 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Rnf149Q3U2C5 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf149Q3U2C5 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf149Q3U2C5 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.45■□□□□ 0.38
Rnf149Q3U2C5 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf149Q3U2C5 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf149Q3U2C5 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf149Q3U2C5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Rnf149Q3U2C5 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf149Q3U2C5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf149Q3U2C5 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf149Q3U2C5 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf149Q3U2C5 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf149Q3U2C5 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf149Q3U2C5 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf149Q3U2C5 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf149Q3U2C5 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf149Q3U2C5 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf149Q3U2C5 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf149Q3U2C5 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf149Q3U2C5 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Rnf149Q3U2C5 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf149Q3U2C5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf149Q3U2C5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Rnf149Q3U2C5 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rnf149Q3U2C5 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Rnf149Q3U2C5 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf149Q3U2C5 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf149Q3U2C5 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf149Q3U2C5 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.43■□□□□ 0.38
Rnf149Q3U2C5 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf149Q3U2C5 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf149Q3U2C5 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf149Q3U2C5 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf149Q3U2C5 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
Rnf149Q3U2C5 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf149Q3U2C5 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf149Q3U2C5 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rnf149Q3U2C5 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf149Q3U2C5 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.42■□□□□ 0.38
Rnf149Q3U2C5 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf149Q3U2C5 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rnf149Q3U2C5 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rnf149Q3U2C5 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf149Q3U2C5 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf149Q3U2C5 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf149Q3U2C5 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.41■□□□□ 0.38
Rnf149Q3U2C5 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.41■□□□□ 0.38
Rnf149Q3U2C5 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf149Q3U2C5 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Rnf149Q3U2C5 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.41■□□□□ 0.38
Rnf149Q3U2C5 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rnf149Q3U2C5 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.41■□□□□ 0.38
Rnf149Q3U2C5 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.41■□□□□ 0.38
Rnf149Q3U2C5 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Rnf149Q3U2C5 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf149Q3U2C5 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.41■□□□□ 0.38
Rnf149Q3U2C5 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf149Q3U2C5 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf149Q3U2C5 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.4■□□□□ 0.38
Rnf149Q3U2C5 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf149Q3U2C5 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf149Q3U2C5 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf149Q3U2C5 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Rnf149Q3U2C5 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf149Q3U2C5 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf149Q3U2C5 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf149Q3U2C5 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.4■□□□□ 0.38
Rnf149Q3U2C5 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rnf149Q3U2C5 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.4■□□□□ 0.38
Rnf149Q3U2C5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf149Q3U2C5 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf149Q3U2C5 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rnf149Q3U2C5 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf149Q3U2C5 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf149Q3U2C5 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf149Q3U2C5 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rnf149Q3U2C5 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rnf149Q3U2C5 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf149Q3U2C5 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf149Q3U2C5 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf149Q3U2C5 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf149Q3U2C5 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf149Q3U2C5 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf149Q3U2C5 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.39■□□□□ 0.37
Rnf149Q3U2C5 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf149Q3U2C5 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms