Protein–RNA interactions for Protein: P97454

Smad5, Mothers against decapentaplegic homolog 5, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad5P97454 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smad5P97454 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.49■□□□□ 0.55
Smad5P97454 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.49■□□□□ 0.55
Smad5P97454 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smad5P97454 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smad5P97454 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Smad5P97454 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smad5P97454 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Smad5P97454 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smad5P97454 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smad5P97454 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smad5P97454 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smad5P97454 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smad5P97454 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Smad5P97454 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smad5P97454 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smad5P97454 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smad5P97454 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smad5P97454 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.48■□□□□ 0.55
Smad5P97454 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smad5P97454 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smad5P97454 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smad5P97454 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.48■□□□□ 0.55
Smad5P97454 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smad5P97454 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smad5P97454 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smad5P97454 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.48■□□□□ 0.55
Smad5P97454 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smad5P97454 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smad5P97454 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smad5P97454 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smad5P97454 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.47■□□□□ 0.55
Smad5P97454 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.47■□□□□ 0.55
Smad5P97454 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
Smad5P97454 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smad5P97454 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Smad5P97454 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Smad5P97454 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.47■□□□□ 0.55
Smad5P97454 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.47■□□□□ 0.55
Smad5P97454 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smad5P97454 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smad5P97454 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.46■□□□□ 0.55
Smad5P97454 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.46■□□□□ 0.55
Smad5P97454 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smad5P97454 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smad5P97454 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smad5P97454 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smad5P97454 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Smad5P97454 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smad5P97454 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Smad5P97454 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Smad5P97454 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smad5P97454 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smad5P97454 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Smad5P97454 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.45■□□□□ 0.54
Smad5P97454 Gm29257-201ENSMUST00000186115 639 ntBASIC18.45■□□□□ 0.54
Smad5P97454 Gm7291-201ENSMUST00000199147 382 ntBASIC18.45■□□□□ 0.54
Smad5P97454 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Smad5P97454 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smad5P97454 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Smad5P97454 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smad5P97454 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Smad5P97454 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Smad5P97454 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smad5P97454 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smad5P97454 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.44■□□□□ 0.54
Smad5P97454 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smad5P97454 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smad5P97454 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
Smad5P97454 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smad5P97454 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smad5P97454 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.44■□□□□ 0.54
Smad5P97454 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smad5P97454 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smad5P97454 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smad5P97454 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Smad5P97454 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smad5P97454 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smad5P97454 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smad5P97454 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.43■□□□□ 0.54
Smad5P97454 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smad5P97454 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smad5P97454 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.43■□□□□ 0.54
Smad5P97454 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smad5P97454 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Smad5P97454 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smad5P97454 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smad5P97454 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smad5P97454 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smad5P97454 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smad5P97454 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Smad5P97454 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.42■□□□□ 0.54
Smad5P97454 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smad5P97454 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.42■□□□□ 0.54
Smad5P97454 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smad5P97454 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.42■□□□□ 0.54
Smad5P97454 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.42■□□□□ 0.54
Smad5P97454 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smad5P97454 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smad5P97454 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms