Protein–RNA interactions for Protein: P97368

Meis3, Homeobox protein Meis3, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Meis3P97368 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Meis3P97368 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.92■□□□□ 0.94
Meis3P97368 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Meis3P97368 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Meis3P97368 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Meis3P97368 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.92■□□□□ 0.94
Meis3P97368 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Meis3P97368 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Meis3P97368 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Meis3P97368 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.91■□□□□ 0.94
Meis3P97368 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Meis3P97368 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Meis3P97368 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Meis3P97368 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Meis3P97368 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Meis3P97368 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Meis3P97368 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Meis3P97368 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.9■□□□□ 0.94
Meis3P97368 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Meis3P97368 Etf1-202ENSMUST00000180351 108 ntBASIC20.9■□□□□ 0.94
Meis3P97368 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Meis3P97368 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Meis3P97368 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Meis3P97368 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Meis3P97368 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Meis3P97368 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Meis3P97368 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.89■□□□□ 0.94
Meis3P97368 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Meis3P97368 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.93
Meis3P97368 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Meis3P97368 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Meis3P97368 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Meis3P97368 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Meis3P97368 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Meis3P97368 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Meis3P97368 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Meis3P97368 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Meis3P97368 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Meis3P97368 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Meis3P97368 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Meis3P97368 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Meis3P97368 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Meis3P97368 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Meis3P97368 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Meis3P97368 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Meis3P97368 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Meis3P97368 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.87■□□□□ 0.93
Meis3P97368 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.87■□□□□ 0.93
Meis3P97368 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Meis3P97368 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Meis3P97368 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Meis3P97368 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Meis3P97368 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Meis3P97368 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Meis3P97368 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Meis3P97368 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Meis3P97368 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.87■□□□□ 0.93
Meis3P97368 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Meis3P97368 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Meis3P97368 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Meis3P97368 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Meis3P97368 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.86■□□□□ 0.93
Meis3P97368 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Meis3P97368 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Meis3P97368 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Meis3P97368 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Meis3P97368 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Meis3P97368 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Meis3P97368 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.85■□□□□ 0.93
Meis3P97368 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.85■□□□□ 0.93
Meis3P97368 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Meis3P97368 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Meis3P97368 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Meis3P97368 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Meis3P97368 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Meis3P97368 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Meis3P97368 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.84■□□□□ 0.93
Meis3P97368 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Meis3P97368 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Meis3P97368 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Meis3P97368 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Meis3P97368 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Meis3P97368 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Meis3P97368 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.84■□□□□ 0.93
Meis3P97368 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Meis3P97368 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Meis3P97368 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.84■□□□□ 0.93
Meis3P97368 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Meis3P97368 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Meis3P97368 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Meis3P97368 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.83■□□□□ 0.93
Meis3P97368 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Meis3P97368 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Meis3P97368 Gm7417-201ENSMUST00000192950 473 ntBASIC20.83■□□□□ 0.93
Meis3P97368 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Meis3P97368 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Meis3P97368 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Meis3P97368 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Meis3P97368 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.83■□□□□ 0.92
Meis3P97368 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms