Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ybx1P62960 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ybx1P62960 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ybx1P62960 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ybx1P62960 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Ybx1P62960 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ybx1P62960 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ybx1P62960 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ybx1P62960 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ybx1P62960 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ybx1P62960 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ybx1P62960 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
Ybx1P62960 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ybx1P62960 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ybx1P62960 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ybx1P62960 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Ybx1P62960 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.1■□□□□ 0.81
Ybx1P62960 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.1■□□□□ 0.81
Ybx1P62960 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ybx1P62960 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ybx1P62960 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ybx1P62960 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ybx1P62960 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ybx1P62960 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.09■□□□□ 0.81
Ybx1P62960 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.09■□□□□ 0.81
Ybx1P62960 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ybx1P62960 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ybx1P62960 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ybx1P62960 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ybx1P62960 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Ybx1P62960 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ybx1P62960 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ybx1P62960 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ybx1P62960 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ybx1P62960 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ybx1P62960 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Ybx1P62960 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ybx1P62960 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Ybx1P62960 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ybx1P62960 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ybx1P62960 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.07■□□□□ 0.8
Ybx1P62960 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ybx1P62960 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Ybx1P62960 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.07■□□□□ 0.8
Ybx1P62960 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ybx1P62960 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ybx1P62960 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Ybx1P62960 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Ybx1P62960 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ybx1P62960 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.06■□□□□ 0.8
Ybx1P62960 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ybx1P62960 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ybx1P62960 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ybx1P62960 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ybx1P62960 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ybx1P62960 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ybx1P62960 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.05■□□□□ 0.8
Ybx1P62960 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.05■□□□□ 0.8
Ybx1P62960 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ybx1P62960 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.05■□□□□ 0.8
Ybx1P62960 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ybx1P62960 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ybx1P62960 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ybx1P62960 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ybx1P62960 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ybx1P62960 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Ybx1P62960 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ybx1P62960 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ybx1P62960 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ybx1P62960 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ybx1P62960 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.04■□□□□ 0.8
Ybx1P62960 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.04■□□□□ 0.8
Ybx1P62960 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ybx1P62960 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.04■□□□□ 0.8
Ybx1P62960 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ybx1P62960 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ybx1P62960 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ybx1P62960 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ybx1P62960 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ybx1P62960 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ybx1P62960 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.04■□□□□ 0.8
Ybx1P62960 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ybx1P62960 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ybx1P62960 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.03■□□□□ 0.8
Ybx1P62960 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ybx1P62960 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ybx1P62960 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ybx1P62960 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ybx1P62960 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ybx1P62960 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ybx1P62960 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.02■□□□□ 0.8
Ybx1P62960 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.02■□□□□ 0.8
Ybx1P62960 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Ybx1P62960 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ybx1P62960 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ybx1P62960 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ybx1P62960 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Ybx1P62960 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Ybx1P62960 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ybx1P62960 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms