Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpl39P62892 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpl39P62892 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpl39P62892 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpl39P62892 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpl39P62892 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Rpl39P62892 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpl39P62892 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rpl39P62892 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Rpl39P62892 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpl39P62892 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpl39P62892 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Rpl39P62892 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpl39P62892 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rpl39P62892 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpl39P62892 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpl39P62892 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC13.9□□□□□ -0.18
Rpl39P62892 Gm12366-201ENSMUST00000121722 873 ntBASIC13.9□□□□□ -0.18
Rpl39P62892 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC13.9□□□□□ -0.18
Rpl39P62892 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rpl39P62892 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rpl39P62892 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpl39P62892 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC13.9□□□□□ -0.18
Rpl39P62892 Gm5786-201ENSMUST00000085368 882 ntBASIC13.9□□□□□ -0.18
Rpl39P62892 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Rpl39P62892 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rpl39P62892 Cdkn3-203ENSMUST00000227149 1952 ntBASIC13.9□□□□□ -0.18
Rpl39P62892 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Rpl39P62892 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpl39P62892 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Rpl39P62892 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpl39P62892 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpl39P62892 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Rpl39P62892 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpl39P62892 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpl39P62892 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC13.89□□□□□ -0.19
Rpl39P62892 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpl39P62892 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpl39P62892 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpl39P62892 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Rpl39P62892 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Rpl39P62892 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Rpl39P62892 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC13.89□□□□□ -0.19
Rpl39P62892 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rpl39P62892 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpl39P62892 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpl39P62892 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rpl39P62892 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpl39P62892 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpl39P62892 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpl39P62892 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Rpl39P62892 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rpl39P62892 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpl39P62892 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpl39P62892 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpl39P62892 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpl39P62892 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Rpl39P62892 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpl39P62892 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpl39P62892 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpl39P62892 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpl39P62892 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpl39P62892 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpl39P62892 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC13.88□□□□□ -0.19
Rpl39P62892 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpl39P62892 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpl39P62892 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Rpl39P62892 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rpl39P62892 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rpl39P62892 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpl39P62892 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rpl39P62892 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC13.87□□□□□ -0.19
Rpl39P62892 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rpl39P62892 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpl39P62892 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpl39P62892 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpl39P62892 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpl39P62892 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC13.87□□□□□ -0.19
Rpl39P62892 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Rpl39P62892 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpl39P62892 Fam105a-203ENSMUST00000226170 3043 ntBASIC13.87□□□□□ -0.19
Rpl39P62892 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rpl39P62892 Gm43231-201ENSMUST00000202960 2258 ntBASIC13.87□□□□□ -0.19
Rpl39P62892 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl39P62892 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl39P62892 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl39P62892 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl39P62892 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl39P62892 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl39P62892 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl39P62892 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl39P62892 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl39P62892 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpl39P62892 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Rpl39P62892 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Rpl39P62892 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Rpl39P62892 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Rpl39P62892 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl39P62892 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rpl39P62892 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms