Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cks1bP61025 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cks1bP61025 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cks1bP61025 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC13.85□□□□□ -0.19
Cks1bP61025 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cks1bP61025 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cks1bP61025 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cks1bP61025 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cks1bP61025 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cks1bP61025 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cks1bP61025 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1bP61025 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1bP61025 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1bP61025 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC13.84□□□□□ -0.19
Cks1bP61025 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1bP61025 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1bP61025 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1bP61025 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1bP61025 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1bP61025 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1bP61025 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1bP61025 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1bP61025 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1bP61025 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1bP61025 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cks1bP61025 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cks1bP61025 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC13.83□□□□□ -0.19
Cks1bP61025 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cks1bP61025 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cks1bP61025 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Cks1bP61025 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Cks1bP61025 Gm5784-201ENSMUST00000179344 2478 ntBASIC13.83□□□□□ -0.2
Cks1bP61025 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cks1bP61025 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cks1bP61025 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cks1bP61025 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cks1bP61025 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Cks1bP61025 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC13.83□□□□□ -0.2
Cks1bP61025 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC13.83□□□□□ -0.2
Cks1bP61025 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cks1bP61025 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cks1bP61025 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cks1bP61025 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cks1bP61025 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Cks1bP61025 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cks1bP61025 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cks1bP61025 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC13.82□□□□□ -0.2
Cks1bP61025 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cks1bP61025 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cks1bP61025 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cks1bP61025 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cks1bP61025 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cks1bP61025 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cks1bP61025 Gm45606-201ENSMUST00000209836 2795 ntBASIC13.82□□□□□ -0.2
Cks1bP61025 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cks1bP61025 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cks1bP61025 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cks1bP61025 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cks1bP61025 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cks1bP61025 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cks1bP61025 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cks1bP61025 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cks1bP61025 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cks1bP61025 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cks1bP61025 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cks1bP61025 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cks1bP61025 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cks1bP61025 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cks1bP61025 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Cks1bP61025 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cks1bP61025 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cks1bP61025 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cks1bP61025 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cks1bP61025 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cks1bP61025 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cks1bP61025 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cks1bP61025 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cks1bP61025 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC13.8□□□□□ -0.2
Cks1bP61025 AC158990.1-201ENSMUST00000221450 2016 ntBASIC13.8□□□□□ -0.2
Cks1bP61025 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cks1bP61025 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cks1bP61025 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cks1bP61025 AC151971.4-201ENSMUST00000214717 704 ntBASIC13.8□□□□□ -0.2
Cks1bP61025 Nsd1-206ENSMUST00000224918 1001 ntBASIC13.8□□□□□ -0.2
Cks1bP61025 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cks1bP61025 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC13.8□□□□□ -0.2
Cks1bP61025 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cks1bP61025 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Cks1bP61025 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cks1bP61025 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cks1bP61025 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cks1bP61025 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cks1bP61025 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
Cks1bP61025 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cks1bP61025 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cks1bP61025 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cks1bP61025 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cks1bP61025 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cks1bP61025 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cks1bP61025 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms