Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne2P59108 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cpne2P59108 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne2P59108 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.4■□□□□ 0.22
Cpne2P59108 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne2P59108 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne2P59108 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne2P59108 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.4■□□□□ 0.22
Cpne2P59108 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne2P59108 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne2P59108 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne2P59108 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.4■□□□□ 0.22
Cpne2P59108 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne2P59108 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne2P59108 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne2P59108 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cpne2P59108 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne2P59108 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne2P59108 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne2P59108 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne2P59108 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne2P59108 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cpne2P59108 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne2P59108 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne2P59108 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne2P59108 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne2P59108 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.39■□□□□ 0.21
Cpne2P59108 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne2P59108 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne2P59108 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne2P59108 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne2P59108 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne2P59108 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne2P59108 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne2P59108 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne2P59108 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne2P59108 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne2P59108 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne2P59108 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cpne2P59108 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne2P59108 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cpne2P59108 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cpne2P59108 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Cpne2P59108 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne2P59108 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Cpne2P59108 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne2P59108 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne2P59108 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne2P59108 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne2P59108 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne2P59108 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne2P59108 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne2P59108 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.37■□□□□ 0.21
Cpne2P59108 Golph3-205ENSMUST00000228671 2842 ntBASIC16.37■□□□□ 0.21
Cpne2P59108 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.37■□□□□ 0.21
Cpne2P59108 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne2P59108 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Cpne2P59108 Rarb-207ENSMUST00000225921 2756 ntBASIC16.37■□□□□ 0.21
Cpne2P59108 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpne2P59108 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Cpne2P59108 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne2P59108 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne2P59108 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne2P59108 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne2P59108 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne2P59108 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne2P59108 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne2P59108 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Cpne2P59108 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne2P59108 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne2P59108 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne2P59108 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne2P59108 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne2P59108 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Cpne2P59108 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.36■□□□□ 0.21
Cpne2P59108 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.36■□□□□ 0.21
Cpne2P59108 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Cpne2P59108 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne2P59108 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Cpne2P59108 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne2P59108 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Cpne2P59108 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne2P59108 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne2P59108 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne2P59108 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Cpne2P59108 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne2P59108 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne2P59108 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne2P59108 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne2P59108 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.35■□□□□ 0.21
Cpne2P59108 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne2P59108 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.35■□□□□ 0.21
Cpne2P59108 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne2P59108 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne2P59108 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne2P59108 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne2P59108 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.35■□□□□ 0.21
Cpne2P59108 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne2P59108 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne2P59108 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms