Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.75■■□□□ 1.07
Tpm1P58771 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tpm1P58771 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
Tpm1P58771 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Tpm1P58771 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tpm1P58771 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tpm1P58771 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tpm1P58771 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tpm1P58771 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tpm1P58771 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Tpm1P58771 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
Tpm1P58771 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tpm1P58771 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tpm1P58771 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Tpm1P58771 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.74■■□□□ 1.07
Tpm1P58771 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tpm1P58771 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Tpm1P58771 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Tpm1P58771 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Tpm1P58771 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tpm1P58771 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tpm1P58771 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.73■■□□□ 1.07
Tpm1P58771 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.73■■□□□ 1.07
Tpm1P58771 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.73■■□□□ 1.07
Tpm1P58771 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.73■■□□□ 1.07
Tpm1P58771 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tpm1P58771 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Tpm1P58771 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tpm1P58771 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Tpm1P58771 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tpm1P58771 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tpm1P58771 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.72■■□□□ 1.07
Tpm1P58771 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tpm1P58771 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tpm1P58771 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tpm1P58771 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tpm1P58771 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tpm1P58771 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tpm1P58771 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tpm1P58771 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Tpm1P58771 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tpm1P58771 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC21.71■■□□□ 1.07
Tpm1P58771 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tpm1P58771 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.71■■□□□ 1.07
Tpm1P58771 Gm7143-201ENSMUST00000222811 859 ntBASIC21.71■■□□□ 1.07
Tpm1P58771 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tpm1P58771 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Tpm1P58771 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tpm1P58771 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
Tpm1P58771 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Tpm1P58771 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Tpm1P58771 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Tpm1P58771 Gm43566-201ENSMUST00000196851 808 ntBASIC21.7■■□□□ 1.06
Tpm1P58771 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tpm1P58771 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tpm1P58771 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tpm1P58771 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Tpm1P58771 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tpm1P58771 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tpm1P58771 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tpm1P58771 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Tpm1P58771 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Tpm1P58771 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Tpm1P58771 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.69■■□□□ 1.06
Tpm1P58771 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tpm1P58771 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tpm1P58771 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
Tpm1P58771 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tpm1P58771 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tpm1P58771 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Tpm1P58771 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Tpm1P58771 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tpm1P58771 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Tpm1P58771 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tpm1P58771 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
Tpm1P58771 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tpm1P58771 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tpm1P58771 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tpm1P58771 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.68■■□□□ 1.06
Tpm1P58771 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Tpm1P58771 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.67■■□□□ 1.06
Tpm1P58771 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Tpm1P58771 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tpm1P58771 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tpm1P58771 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tpm1P58771 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.67■■□□□ 1.06
Tpm1P58771 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tpm1P58771 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.67■■□□□ 1.06
Tpm1P58771 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Tpm1P58771 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tpm1P58771 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Tpm1P58771 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tpm1P58771 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tpm1P58771 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Tpm1P58771 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Tpm1P58771 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Tpm1P58771 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tpm1P58771 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tpm1P58771 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tpm1P58771 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms